Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0451
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin ... 92 4e-19
U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical pr... 74 9e-14
AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical ... 50 2e-06
U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 33 0.16
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 33 0.21
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 33 0.21
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 31 1.1
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 29 3.5
U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 28 8.0
>AC024756-6|AAK29881.1| 105|Caenorhabditis elegans Glutaredoxin
protein 10 protein.
Length = 105
Score = 91.9 bits (218), Expect = 4e-19
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = +2
Query: 113 FIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVK---QPIKVIELNERDDGNTIQDNLAQL 283
F+ + KVVVFSKSYCPYC A+ E V ++ IE++ER D N IQD L L
Sbjct: 5 FVDGLLQSSKVVVFSKSYCPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSL 64
Query: 284 TGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
TG R+VP+VFING GGG D A ++GKL +L
Sbjct: 65 TGARSVPRVFINGKFFGGGDDTAAGAKNGKLAALL 99
>U40945-3|AAA81721.2| 146|Caenorhabditis elegans Hypothetical
protein F10D7.3 protein.
Length = 146
Score = 74.1 bits (174), Expect = 9e-14
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 101 DIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVK-QPIKVIELNERDDGNTIQDNLA 277
D++ I + KV+V+SK+YCP+ K K + + +K++EL+ + +Q+ L
Sbjct: 32 DLEDKIVNDVMTHKVMVYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILK 91
Query: 278 QLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
+ +G TVPQ+FI+G VGG + KA+ E G+L P+L
Sbjct: 92 KYSGRTTVPQLFISGKFVGGHDETKAIEEKGELRPLL 128
>AC006831-2|AAF39994.2| 119|Caenorhabditis elegans Hypothetical
protein ZK121.1a protein.
Length = 119
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIEL-----NERDDGNTIQDNLAQ 280
++E + KD VV+++K+ C +C AKD+F V+ K + L ++ DD I + L
Sbjct: 13 VQEQVKKDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVY 72
Query: 281 LTGFRTVPQVFINGNCVGGGSDVKALYESGKL 376
T +VPQ+F+ G +GG +++ AL SG L
Sbjct: 73 TTRQTSVPQIFVCGRFIGGYTELDALRNSGHL 104
>AC006831-3|ABD63200.1| 96|Caenorhabditis elegans Hypothetical
protein ZK121.1b protein.
Length = 96
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +2
Query: 149 VFSKSYCPYCKLAKDVFEKVKQPIKVIELN-----ERDDGNTIQDNLAQLTGFRTVPQVF 313
+++K+ C +C AKD+F V+ K + L+ + DD I + L T +VPQ+F
Sbjct: 1 MYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIF 60
Query: 314 INGNCVGGGSDVKALYESGKL 376
+ G +GG +++ AL SG L
Sbjct: 61 VCGRFIGGYTELDALRNSGHL 81
>U58751-6|AAZ82854.1| 131|Caenorhabditis elegans Hypothetical
protein C07G1.8 protein.
Length = 131
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD------NLA 277
I E + + VV+++K C YC AK+ E + I E N I + L
Sbjct: 20 IVEEVKEHAVVLYTKDGCGYCVKAKN--ELYEDGIHYTEKNLNTVSKVIPNPQEYIQGLM 77
Query: 278 QLTGFRTVPQVFINGNCVGGGSDVKAL 358
LT RTVPQ+FI G VGG +++ AL
Sbjct: 78 DLTRQRTVPQIFICGKFVGGYTELNAL 104
>Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical
protein ZC334.7 protein.
Length = 210
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +2
Query: 113 FIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQ--PIKVIEL-NERDDGNTIQDNLAQL 283
+I + V++++ C C+ AK + P +EL + D +Q +L ++
Sbjct: 108 YINRQARRYPVMMYTLIQCVPCQRAKHLLATTYGDIPSHFLELVGDEDWQRQLQVDLLKV 167
Query: 284 TGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
T T P VF+ GN +GG SD+ ++ SG+L L
Sbjct: 168 TRQATFPYVFVCGNFIGGSSDLFNMHHSGQLRQAL 202
>Z98866-2|CAB11547.1| 142|Caenorhabditis elegans Hypothetical
protein Y49E10.2 protein.
Length = 142
Score = 36.7 bits (81), Expect = 0.017
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 95 SVDIQQFIKEAISKDKVVVFSKSYC--PYCKLAKDVFEKVK-QPIKVIELNERDDGNTIQ 265
S ++++ I + KD VVVF K P C +++V + +K + N D ++
Sbjct: 31 SDEVRKRIDGIVKKDDVVVFMKGTQQEPACGFSRNVKLVLDFHNVKFQDYNVLTD-QELR 89
Query: 266 DNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
+ + + + T+PQV++ G VGG + ++++ G++ L
Sbjct: 90 EGVKIFSEWPTIPQVYVKGEFVGGCDILISMHKDGEISDFL 130
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/88 (20%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 104 IQQFIKEAISKDKVVVFSKS-----YCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD 268
++ +K+ +S ++++F K C + + D+ K + ++ E ++ ++
Sbjct: 243 LEDRLKKLVSSQRLMLFMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEE---VRQ 299
Query: 269 NLAQLTGFRTVPQVFINGNCVGGGSDVK 352
L + + + T PQ++++G VGG VK
Sbjct: 300 GLKKFSNWPTYPQLYLDGELVGGLDVVK 327
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 128 ISKDKVVVFSKS--YCPYCKLAKDVFEKVKQ-PIKVIELNERDDGNTIQDNLAQLTGFRT 298
++ KV+VF K P C ++ + E + IK + D ++ L + + + T
Sbjct: 143 VNSQKVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPT 201
Query: 299 VPQVFINGNCVGGGSDVK 352
PQ++ +G +GG VK
Sbjct: 202 YPQLYFDGELIGGLDVVK 219
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +2
Query: 89 AGSVDIQQFIKEAISKDKVVVFSKS---------YCPYCKLAKDVFEKVKQPIKVIELNE 241
A + +++ +KEA + K+V+F S + Y K+ + K P+++ E+ +
Sbjct: 63 APGIPLKEALKEA-ANSKIVIFYNSSDEEKQLVEFETYLNSLKEPADAEK-PLEIPEIKK 120
Query: 242 RDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 358
Q + LT + P ++I GN VGG ++KAL
Sbjct: 121 LQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +2
Query: 89 AGSVDIQQFIKEAISKDKVVVFSKS---------YCPYCKLAKDVFEKVKQPIKVIELNE 241
A + +++ +KEA + K+V+F S + Y K+ + K P+++ E+ +
Sbjct: 63 APGIPLKEALKEA-ANSKIVIFYNSSDEEKQLVEFETYLNSLKEPADAEK-PLEIPEIKK 120
Query: 242 RDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKAL 358
Q + LT + P ++I GN VGG ++KAL
Sbjct: 121 LQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 128 ISKDKVVVFSKS--YCPYCKLAKDVFEKVKQ-PIKVIELNERDDGNTIQDNLAQLTGFRT 298
++ KV+VF K P C ++ + E + IK + D ++ L + + + T
Sbjct: 143 VNSQKVMVFMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSD-EAVRQGLKEYSNWPT 201
Query: 299 VPQVFINGNCVGGGSDVK 352
PQ++ +G +GG VK
Sbjct: 202 YPQLYFDGELIGGLDVVK 219
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 466 NILYVHQNINLNMQIIIKQLI*NLSYQHRF 377
N+ + +N N+ Q++ ++I NL+YQHRF
Sbjct: 72 NLYELRENRNIKPQVL-SEMISNLAYQHRF 100
>U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical
protein F58F9.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 149 VFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGN 325
V + + CP C+ DV +KVK+ +K L+ DGN+ L F VP + N
Sbjct: 162 VETSNKCP-CRAMIDVSDKVKRNLKTFPLSVDYDGNSCTAR-QNLEYFNNVPTQIVPCN 218
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 339 PPPTQLPFIKT*GTVLKP 286
PPPT+LP I T GT P
Sbjct: 425 PPPTRLPLITTIGTTTNP 442
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,725,357
Number of Sequences: 27780
Number of extensions: 349830
Number of successful extensions: 927
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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