Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0450
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001666-1|AAH01666.1| 941|Homo sapiens PRP6 pre-mRNA processin... 242 6e-64
AL356790-1|CAH71582.1| 941|Homo sapiens PRP6 pre-mRNA processin... 242 6e-64
AL355803-2|CAC16610.2| 941|Homo sapiens PRP6 pre-mRNA processin... 242 6e-64
AL137320-1|CAB70695.1| 540|Homo sapiens hypothetical protein pr... 242 6e-64
AL118506-15|CAI21906.1| 941|Homo sapiens PRP6 pre-mRNA processi... 242 6e-64
AF221842-1|AAF66128.1| 941|Homo sapiens U5 snRNP-associated 102... 242 6e-64
AF026031-1|AAD01798.1| 941|Homo sapiens putative mitochondrial ... 242 6e-64
AB019219-1|BAA37140.1| 941|Homo sapiens protein ( Homo sapiens ... 242 6e-64
BC127680-1|AAI27681.1| 624|Homo sapiens LOC91893 protein protein. 35 0.16
BC006136-1|AAH06136.1| 625|Homo sapiens Unknown (protein for IM... 35 0.16
AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like ... 33 0.66
AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like ... 33 0.66
AK023246-1|BAB14485.1| 564|Homo sapiens protein ( Homo sapiens ... 33 0.66
AK022908-1|BAB14303.1| 564|Homo sapiens protein ( Homo sapiens ... 33 0.66
AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type I... 33 0.66
AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short ... 33 0.66
AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein. 33 0.66
AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein. 33 0.66
AB016840-1|BAC53587.1| 687|Homo sapiens crn protein. 33 0.66
DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant pro... 33 0.87
BC132719-1|AAI32720.1| 1044|Homo sapiens CCDC129 protein protein. 33 0.87
BC051883-1|AAH51883.2| 1166|Homo sapiens castor zinc finger 1 pr... 33 0.87
BC004410-1|AAH04410.2| 614|Homo sapiens CASZ1 protein protein. 33 0.87
AL139423-3|CAI22571.1| 1166|Homo sapiens castor zinc finger 1 pr... 33 0.87
AK128026-1|BAC87235.1| 896|Homo sapiens protein ( Homo sapiens ... 33 0.87
AK000328-1|BAA91089.1| 1044|Homo sapiens protein ( Homo sapiens ... 33 0.87
BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177 ... 32 1.5
AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens ... 32 1.5
AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein. 32 1.5
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 31 2.0
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 31 2.0
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 31 2.0
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 31 2.0
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 31 2.0
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende... 31 2.0
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 31 2.0
CR457112-1|CAG33393.1| 353|Homo sapiens PNMA1 protein. 31 2.7
BC039577-1|AAH39577.1| 353|Homo sapiens paraneoplastic antigen ... 31 2.7
AL834327-1|CAD38995.1| 192|Homo sapiens hypothetical protein pr... 31 2.7
AF320308-1|AAN05100.1| 353|Homo sapiens paraneoplastic antigen ... 31 2.7
AF037364-1|AAD13810.3| 353|Homo sapiens paraneoplastic neuronal... 31 2.7
D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein. 30 4.6
AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 1... 30 4.6
AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 1... 30 4.6
AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 1... 30 4.6
AK125202-1|BAC86083.1| 197|Homo sapiens protein ( Homo sapiens ... 30 4.6
AY541517-1|AAS64377.1| 162|Homo sapiens polyamine oxidase splic... 30 6.1
AK124341-1|BAC85837.1| 197|Homo sapiens protein ( Homo sapiens ... 30 6.1
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine... 29 8.1
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein. 29 8.1
>BC001666-1|AAH01666.1| 941|Homo sapiens PRP6 pre-mRNA processing
factor 6 homolog (S. cerevisiae) protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AL356790-1|CAH71582.1| 941|Homo sapiens PRP6 pre-mRNA processing
factor 6 homolog (S. cerevisiae) protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AL355803-2|CAC16610.2| 941|Homo sapiens PRP6 pre-mRNA processing
factor 6 homolog (S. cerevisiae) protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AL137320-1|CAB70695.1| 540|Homo sapiens hypothetical protein
protein.
Length = 540
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 78 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 137
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 138 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 197
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 198 RAVAHCPKAEVLWLMGAKSKWL 219
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 231 ALAFQANPNSEEIWLAAVKLESENDEYER 259
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 159 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 215
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 216 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 275
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 276 V-FMKSVKLEWVQ 287
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 356 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 413
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 305 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 364
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 365 LEKSRLKNPKNPGLWLESVRLEY 387
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 14 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 73
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 74 EANGNTQMVEKIIDRAI 90
>AL118506-15|CAI21906.1| 941|Homo sapiens PRP6 pre-mRNA processing
factor 6 homolog (S. cerevisiae) protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AF221842-1|AAF66128.1| 941|Homo sapiens U5 snRNP-associated 102
kDa protein protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AF026031-1|AAD01798.1| 941|Homo sapiens putative mitochondrial
outer membrane protein import receptor protein.
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>AB019219-1|BAA37140.1| 941|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, similar to yeast pre-mRNA splicing
factors, Prp1/Zer1 and Prp6. ).
Length = 941
Score = 242 bits (592), Expect = 6e-64
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = +3
Query: 3 NTHMVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPED 182
NT MVEKIIDRAITSL ANGVEINRE W ++A E +++G+V+TCQA++RAVIG GIE ED
Sbjct: 479 NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEED 538
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
+KHTWMEDA++C A ECARA+Y YAL VFPSKKS+WLRAAY EK HGTR SLE LLQ
Sbjct: 539 RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQ 598
Query: 363 RAVAHCPKSEVLWLMGAKSKWL 428
RAVAHCPK+EVLWLMGAKSKWL
Sbjct: 599 RAVAHCPKAEVLWLMGAKSKWL 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 464 SLAFQANPNSEEIWLAAVKLESENKEYDR 550
+LAFQANPNSEEIWLAAVKLESEN EY+R
Sbjct: 632 ALAFQANPNSEEIWLAAVKLESENDEYER 660
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +3
Query: 33 RAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAE 212
RAI + + + W + A + G + +A+++ + H + E W+ A+
Sbjct: 560 RAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEV---LWLMGAK 616
Query: 213 ACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSE 392
+ G AR++ A P+ + IWL A LE ++ LL +A + P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676
Query: 393 VLWLMGAKSKWLR 431
V ++ K +W++
Sbjct: 677 V-FMKSVKLEWVQ 688
Score = 38.7 bits (86), Expect = 0.013
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLW 401
G ARA+ + P +WL + LE + G + TL+ +A+ CP S +LW
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Score = 38.3 bits (85), Expect = 0.018
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +3
Query: 177 EDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETL 356
ED WM + + E AR Y L P +WL + LE++ G +
Sbjct: 706 EDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Query: 357 LQRAVAHCPKSEVLWLMGAKSKW 425
L+++ PK+ LWL + ++
Sbjct: 766 LEKSRLKNPKNPGLWLESVRLEY 788
Score = 35.9 bits (79), Expect = 0.094
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 171 EPEDQKHTWMEDAEACATE----------GAFECARAVYGYALSVFPSKKSIWLRAAYLE 320
EPED + E C T +E AR V A P+ + IW+ AA LE
Sbjct: 415 EPEDARIMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 321 KQHGTRASLETLLQRAV 371
+ +G +E ++ RA+
Sbjct: 475 EANGNTQMVEKIIDRAI 491
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 279 PSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAK 416
P W+ +A LE+ G L+ + CPKSE +WL A+
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAR 351
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W+ A G + AR + + P + +WL AA L Q G A + ++ +AV
Sbjct: 312 WIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARL--QPGDTA--KAVVAQAVR 367
Query: 375 HCPKSEVLWLMGAK 416
H P+S +++ A+
Sbjct: 368 HLPQSVRIYIRAAE 381
>BC127680-1|AAI27681.1| 624|Homo sapiens LOC91893 protein protein.
Length = 624
Score = 35.1 bits (77), Expect = 0.16
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = -1
Query: 541 LFVLALQFDGGQPDLFRVGIGLEGQRPGYPGPLVRRXRSHLDLAPMSHSTSDLGQCATAR 362
+F +L F+G QP +FR+ +G + P LV + AP H + + A
Sbjct: 193 IFTRSLPFEGSQPRIFRIKLGNQWFSFPEPEALVGKLNRGFLEAPSCHPIKTINEKLIAE 252
Query: 361 CSSVSRLARVPCCF 320
V L R+ C +
Sbjct: 253 LGKVFPLKRLKCSY 266
>BC006136-1|AAH06136.1| 625|Homo sapiens Unknown (protein for
IMAGE:3677165) protein.
Length = 625
Score = 35.1 bits (77), Expect = 0.16
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = -1
Query: 541 LFVLALQFDGGQPDLFRVGIGLEGQRPGYPGPLVRRXRSHLDLAPMSHSTSDLGQCATAR 362
+F +L F+G QP +FR+ +G + P LV + AP H + + A
Sbjct: 194 IFTRSLPFEGSQPRIFRIKLGNQWFSFPEPEALVGKLNRGFLEAPSCHPIKTINEKLIAE 253
Query: 361 CSSVSRLARVPCCF 320
V L R+ C +
Sbjct: 254 LGKVFPLKRLKCSY 267
>AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 836
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 286 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 336
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 337 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 391
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 233 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 292
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 293 TLPRVNQFW 301
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 267 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 326
Query: 375 HCPKSE 392
P+ +
Sbjct: 327 WQPEEQ 332
>AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 848
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 298 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 348
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 349 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 403
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 305 TLPRVNQFW 313
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 279 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 338
Query: 375 HCPKSE 392
P+ +
Sbjct: 339 WQPEEQ 344
>AK023246-1|BAB14485.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ13184 fis, clone NT2RP3004206, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 564
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 14 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 64
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 65 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 119
>AK022908-1|BAB14303.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ12846 fis, clone NT2RP2003308, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 564
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 14 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 64
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 65 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 119
>AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type II
protein.
Length = 848
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 298 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 348
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 349 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 403
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 305 TLPRVNQFW 313
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 279 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 338
Query: 375 HCPKSE 392
P+ +
Sbjct: 339 WQPEEQ 344
>AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short
form protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 137 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 187
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 188 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 242
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 144 TLPRVNQFW 152
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 177
Query: 375 HCPKSE 392
P+ +
Sbjct: 178 WQPEEQ 183
>AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein.
Length = 836
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 286 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 336
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 337 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 391
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 233 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 292
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 293 TLPRVNQFW 301
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 267 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 326
Query: 375 HCPKSE 392
P+ +
Sbjct: 327 WQPEEQ 332
>AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 137 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 187
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 188 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 242
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 144 TLPRVNQFW 152
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 177
Query: 375 HCPKSE 392
P+ +
Sbjct: 178 WQPEEQ 183
>AB016840-1|BAC53587.1| 687|Homo sapiens crn protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.66
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +3
Query: 24 IIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWME 203
I DRAIT+L +N + W+K E G V+ R V +E + ++ W
Sbjct: 137 IWDRAITTLP----RVN-QFWYKYTYMEEMLGNVAGA----RQVFERWMEWQPEEQAWHS 187
Query: 204 DAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
+ AR +Y + V P K+ W++ A E++H A + +RAV
Sbjct: 188 YINFELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERAV 242
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ A+ + + AR++Y AL V ++WL+ A +E ++ + RA+
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 375 HCPKSEVLW 401
P+ W
Sbjct: 144 TLPRVNQFW 152
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVA 374
W++ AE AR ++ A++ P W + Y+E+ G A + +R +
Sbjct: 118 WLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWME 177
Query: 375 HCPKSE 392
P+ +
Sbjct: 178 WQPEEQ 183
>DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant
protein.
Length = 1759
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 277 SRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
S+ SLS +P + +SS LA A+ +GPS T P P G +P A
Sbjct: 733 SKNSSLSA-SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQ--GLPGSIPLALA 789
Query: 457 ILVAGLPGQSQL*RDLVGRRQT 522
+ +GLP + L GR T
Sbjct: 790 LSNSGLPTPTPYFPILAGRGST 811
>BC132719-1|AAI32720.1| 1044|Homo sapiens CCDC129 protein protein.
Length = 1044
Score = 32.7 bits (71), Expect = 0.87
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 259 GTRCPCSRPRSLSGFAPPTWRSSTGLAPAS 348
G PCS L+ F PPT +ST ++P+S
Sbjct: 990 GQEAPCSGGTQLAAFTPPTLENSTRMSPSS 1019
>BC051883-1|AAH51883.2| 1166|Homo sapiens castor zinc finger 1
protein.
Length = 1166
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 277 SRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
S+ SLS +P + +SS LA A+ +GPS T P P G +P A
Sbjct: 733 SKNSSLSA-SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQ--GLPGSIPLALA 789
Query: 457 ILVAGLPGQSQL*RDLVGRRQT 522
+ +GLP + L GR T
Sbjct: 790 LSNSGLPTPTPYFPILAGRGST 811
>BC004410-1|AAH04410.2| 614|Homo sapiens CASZ1 protein protein.
Length = 614
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 277 SRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
S+ SLS +P + +SS LA A+ +GPS T P P G +P A
Sbjct: 181 SKNSSLSA-SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQ--GLPGSIPLALA 237
Query: 457 ILVAGLPGQSQL*RDLVGRRQT 522
+ +GLP + L GR T
Sbjct: 238 LSNSGLPTPTPYFPILAGRGST 259
>AL139423-3|CAI22571.1| 1166|Homo sapiens castor zinc finger 1
protein.
Length = 1166
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 277 SRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
S+ SLS +P + +SS LA A+ +GPS T P P G +P A
Sbjct: 733 SKNSSLSA-SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQ--GLPGSIPLALA 789
Query: 457 ILVAGLPGQSQL*RDLVGRRQT 522
+ +GLP + L GR T
Sbjct: 790 LSNSGLPTPTPYFPILAGRGST 811
>AK128026-1|BAC87235.1| 896|Homo sapiens protein ( Homo sapiens
cDNA FLJ46145 fis, clone TESTI4000370. ).
Length = 896
Score = 32.7 bits (71), Expect = 0.87
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 259 GTRCPCSRPRSLSGFAPPTWRSSTGLAPAS 348
G PCS L+ F PPT +ST ++P+S
Sbjct: 842 GQEAPCSGGTQLAAFTPPTLENSTRMSPSS 871
>AK000328-1|BAA91089.1| 1044|Homo sapiens protein ( Homo sapiens
cDNA FLJ20321 fis, clone HEP09380. ).
Length = 1044
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 277 SRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
S+ SLS +P + +SS LA A+ +GPS T P P G +P A
Sbjct: 611 SKNSSLSA-SPTSQQSSASLAAATAATEAGPSATKPPNSKISGLLPQ--GLPGSIPLALA 667
Query: 457 ILVAGLPGQSQL*RDLVGRRQT 522
+ +GLP + L GR T
Sbjct: 668 LSNSGLPTPTPYFPILAGRGST 689
>BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177
protein.
Length = 234
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 304 APPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
APP W G AP+ RR GP +T+ + C +P + P G
Sbjct: 185 APPAW----GQAPSPRRSVGGPQKTLKRPKACSPRSPQHTPGVFSAPEKLG 231
>AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ36797 fis, clone ADRGL2006846. ).
Length = 234
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 304 APPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPSPSGFAXDVPAARG 456
APP W G AP+ RR GP +T+ + C +P + P G
Sbjct: 185 APPAW----GQAPSPRRSVGGPQKTLKRPKACSPRSPQHTPGVFSAPEKLG 231
>AF226051-1|AAF86951.1| 855|Homo sapiens HCNP protein.
Length = 855
Score = 31.9 bits (69), Expect = 1.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 271 PCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSWAPS 417
PCS S T S T ++P +R G S T P++R C W PS
Sbjct: 342 PCSSTASCCAKTHTTCTSGTSVSPCTR-AAPGRSST-PTQRLCRRWTPS 388
>U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 1182
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 1016 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 1059
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 2339 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 2382
>U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive
calcium channel protein.
Length = 1194
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 1028 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 1071
>AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q type
calcium channel alpha 1A subunit protein.
Length = 980
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 814 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 857
>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform A-1 protein.
Length = 2510
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 2344 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 2387
>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2506
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 2340 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 2383
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 265 RCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
R P L+G PPT S+G +P R GP+R+ R C
Sbjct: 2352 RYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRAC 2395
>CR457112-1|CAG33393.1| 353|Homo sapiens PNMA1 protein.
Length = 353
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 335 SRQPRDAAAAGRRALSQVGGAVAHGRQVQVASXATYQRPG 454
S P A +AL QV G+V R Q+ TYQ PG
Sbjct: 219 SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPG 258
>BC039577-1|AAH39577.1| 353|Homo sapiens paraneoplastic antigen MA1
protein.
Length = 353
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 335 SRQPRDAAAAGRRALSQVGGAVAHGRQVQVASXATYQRPG 454
S P A +AL QV G+V R Q+ TYQ PG
Sbjct: 219 SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPG 258
>AL834327-1|CAD38995.1| 192|Homo sapiens hypothetical protein
protein.
Length = 192
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 335 SRQPRDAAAAGRRALSQVGGAVAHGRQVQVASXATYQRPG 454
S P A +AL QV G+V R Q+ TYQ PG
Sbjct: 58 SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPG 97
>AF320308-1|AAN05100.1| 353|Homo sapiens paraneoplastic antigen
protein.
Length = 353
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 335 SRQPRDAAAAGRRALSQVGGAVAHGRQVQVASXATYQRPG 454
S P A +AL QV G+V R Q+ TYQ PG
Sbjct: 219 SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPG 258
>AF037364-1|AAD13810.3| 353|Homo sapiens paraneoplastic neuronal
antigen MA1 protein.
Length = 353
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 335 SRQPRDAAAAGRRALSQVGGAVAHGRQVQVASXATYQRPG 454
S P A +AL QV G+V R Q+ TYQ PG
Sbjct: 219 SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPG 258
>D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.
Length = 1884
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/86 (20%), Positives = 36/86 (41%)
Frame = +3
Query: 135 QAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAY 314
Q + V ++ + ++ A+ A F+ A +Y L F +K++W++
Sbjct: 1687 QESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGA 1746
Query: 315 LEKQHGTRASLETLLQRAVAHCPKSE 392
+ A+ +LQRA+ P E
Sbjct: 1747 FLLRRSQAAASHRVLQRALECLPSKE 1772
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
G E A+A++ LS +P + +W + +HG++ + + +R +
Sbjct: 1788 GDAERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1835
>AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/86 (20%), Positives = 36/86 (41%)
Frame = +3
Query: 135 QAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAY 314
Q + V ++ + ++ A+ A F+ A +Y L F +K++W++
Sbjct: 1674 QESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGA 1733
Query: 315 LEKQHGTRASLETLLQRAVAHCPKSE 392
+ A+ +LQRA+ P E
Sbjct: 1734 FLLRRSQAAASHRVLQRALECLPSKE 1759
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
G E A+A++ LS +P + +W + +HG++ + + +R +
Sbjct: 1775 GDAERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1822
>AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/86 (20%), Positives = 36/86 (41%)
Frame = +3
Query: 135 QAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAY 314
Q + V ++ + ++ A+ A F+ A +Y L F +K++W++
Sbjct: 1674 QESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGA 1733
Query: 315 LEKQHGTRASLETLLQRAVAHCPKSE 392
+ A+ +LQRA+ P E
Sbjct: 1734 FLLRRSQAAASHRVLQRALECLPSKE 1759
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
G E A+A++ LS +P + +W + +HG++ + + +R +
Sbjct: 1775 GDAERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1822
>AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/86 (20%), Positives = 36/86 (41%)
Frame = +3
Query: 135 QAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAY 314
Q + V ++ + ++ A+ A F+ A +Y L F +K++W++
Sbjct: 1674 QESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGA 1733
Query: 315 LEKQHGTRASLETLLQRAVAHCPKSE 392
+ A+ +LQRA+ P E
Sbjct: 1734 FLLRRSQAAASHRVLQRALECLPSKE 1759
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +3
Query: 228 GAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
G E A+A++ LS +P + +W + +HG++ + + +R +
Sbjct: 1775 GDAERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1822
>AK125202-1|BAC86083.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ43212 fis, clone FEBRA2020886. ).
Length = 197
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 405 MGAKSKWLRX-RRTSGPGYPGRWPSRPIPTLKRSGWPPSNWRART 536
+ + KW+ RR S G W P P K G PP + R R+
Sbjct: 123 VSCRKKWVEPERRLSEEGRGRAWGGSPTPHPKSQGLPPGSGRGRS 167
>AY541517-1|AAS64377.1| 162|Homo sapiens polyamine oxidase splice
variant 6 protein.
Length = 162
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 331 GLAPASRRCCSGPSRTVPSRRCCGSWAPSPS-GFAXDVPAARG 456
G+A +RR G + T PSR C GSW P P+ G A AA G
Sbjct: 22 GIAGRARR--RGSAATPPSRTC-GSWRPRPAPGAASARSAASG 61
>AK124341-1|BAC85837.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ42350 fis, clone UTERU2005004. ).
Length = 197
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 405 MGAKSKWLRX-RRTSGPGYPGRWPSRPIPTLKRSGWPPSNWRART 536
+ + KW+ RR S G W P P K G PP + R R+
Sbjct: 123 VSCRKKWVEPERRLSEEGRGRAWGGSPTPHPKPQGLPPGSGRGRS 167
>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
receptor protein.
Length = 5038
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 108 EKSGAVSTCQAIIRAVIGHG--IEPEDQKHTWMEDAEAC 218
++S S CQA+ R ++G+G IEP DQ+ + +E+ C
Sbjct: 1031 KRSNRDSLCQAV-RTLLGYGYNIEPPDQEPSQVENQSRC 1068
>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
Length = 5032
Score = 29.5 bits (63), Expect = 8.1
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 108 EKSGAVSTCQAIIRAVIGHG--IEPEDQKHTWMEDAEAC 218
++S S CQA+ R ++G+G IEP DQ+ + +E+ C
Sbjct: 1031 KRSNRDSLCQAV-RTLLGYGYNIEPPDQEPSQVENQSRC 1068
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,553,440
Number of Sequences: 237096
Number of extensions: 1880656
Number of successful extensions: 6571
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6515
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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