Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0450
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 136 7e-33
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 32 0.24
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 29 2.9
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 29 2.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 3.9
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 28 5.1
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 28 5.1
Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical pr... 27 8.9
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF099913-3|AAC68750.1| 143|Caenorhabditis elegans Hypothetical ... 27 8.9
AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical ... 27 8.9
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 27 8.9
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 136 bits (330), Expect = 7e-33
Identities = 66/142 (46%), Positives = 91/142 (64%)
Frame = +3
Query: 12 MVEKIIDRAITSLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKH 191
MV+KI+ +A++SL N VEINR+ W K+A++AE + TCQAIIR VIG G+E ED++
Sbjct: 508 MVDKIVAKAMSSLKVNQVEINRDQWLKDAVDAEMAKCPITCQAIIRNVIGLGVEDEDKRT 567
Query: 192 TWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAV 371
TW+ DAE E AF C R VY AL F K+SIW A + E++HG+ E +L +A
Sbjct: 568 TWLADAENFEKEEAFTCVRTVYAIALKEFSRKRSIWDAAIHFEREHGSLDEHEAILLKAC 627
Query: 372 AHCPKSEVLWLMGAKSKWLRXR 437
P+ E WLM AK +++ R
Sbjct: 628 ETVPEVEDYWLMLAKLRFVNKR 649
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 243 ARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAKSK 422
AR Y + P +W+ LE++ G L++A PK++ LWL + +
Sbjct: 755 ARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLRNPKNDDLWLESVRFE 814
Query: 423 WLRXRRTSGPGYPGRWPSRPIPTLKRSG--WPPSNW 524
+R P SR + + SG W + W
Sbjct: 815 ----QRVGCPEMAKERMSRALQECEGSGKLWAEAIW 846
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 491 SEEIWLAAVKLESENKEYD 547
SE+IWLAA K+E E ++D
Sbjct: 668 SEKIWLAATKIEIETDQFD 686
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 195 WMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRA-SLETL 356
W+E G E A+ AL +W A ++E HG RA S++ L
Sbjct: 807 WLESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHGRRAKSIDAL 861
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 180 DQKHTWMEDAEACATEGAFECARAVYGYALSVFP-SKKSIWL--RAAYLEKQHGTRASLE 350
+Q W AE T+ + AR + AL P +++ + L + A LE +HG
Sbjct: 1591 NQLEVWTLLAEHLMTQNDQKAARELLPRALKSAPKAQQHVQLISKFAQLEFKHGDAERGR 1650
Query: 351 TLLQRAVAHCPKSEVLWLMGAKS 419
TLL+ V PK LWL+ A++
Sbjct: 1651 TLLEGLVTAHPKKTDLWLVYAEA 1673
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +3
Query: 183 QKHTWMEDAEACATEGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQ 362
Q W++ + + G + AR+V+ AL V SIWL+ A +E + +
Sbjct: 85 QLANWIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFD 144
Query: 363 RAVAHCPKSEVLWL 404
RA+ P++ WL
Sbjct: 145 RAITIMPRAMQFWL 158
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +3
Query: 57 NGVEINR---EHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHT-WMEDAEACAT 224
+G+ NR +W K E G + R+V ++ + + + W++ AE
Sbjct: 77 DGIRKNRMQLANWIKYGKWEESIGEIQRA----RSVFERALDVDHRSISIWLQYAEMEMR 132
Query: 225 EGAFECARAVYGYALSVFPSKKSIWLRAAYLEK 323
AR V+ A+++ P WL+ +Y+E+
Sbjct: 133 CKQINHARNVFDRAITIMPRAMQFWLKYSYMEE 165
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/75 (21%), Positives = 27/75 (36%)
Frame = +3
Query: 300 LRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAKSKWLRXRRTSGPGYPGRWPSR 479
+ AAY+ + + S HC +SE++ + G KW + G
Sbjct: 14 ISAAYISSEDLEKPSSADKPVHEKNHCTRSELMRMGGRLVKWFKDVHAQESGADHTLKLH 73
Query: 480 PIPTLKRSGWPPSNW 524
+P GW + W
Sbjct: 74 SVPCRVEVGWMFNQW 88
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/75 (21%), Positives = 27/75 (36%)
Frame = +3
Query: 300 LRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWLMGAKSKWLRXRRTSGPGYPGRWPSR 479
+ AAY+ + + S HC +SE++ + G KW + G
Sbjct: 14 ISAAYISSEDLEKPSSADKPVHEKNHCTRSELMRMGGRLVKWFKDVHAQESGADHTLKLH 73
Query: 480 PIPTLKRSGWPPSNW 524
+P GW + W
Sbjct: 74 SVPCRVEVGWMFNQW 88
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 401 PQHLRLGTVRDGPLQQRLEAGASPVLLLQVGGAKPDRLLGREHGQ 267
P+ +R +RD QQR E + PV Q P+ G E Q
Sbjct: 2987 PEEMRAEVIRDYQRQQRAERASRPVPAAQPVAVNPNAPAGGEAAQ 3031
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +2
Query: 353 AAAAGRRALSQVGGAVAHGRQVQVASXATYQRPGVSWSLAFQANPNSEEIWLAAV 517
A AAG A Q GGA+A Q+ + Q G + QA SE W AV
Sbjct: 48 AGAAGAGAAGQAGGAIAQIGQLYQLAQGALQLTGTGVGVLNQA---SEGNWFPAV 99
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 27.9 bits (59), Expect = 5.1
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 105 AEKSGAVSTCQAIIRAVIGHGIEP-EDQKHTWMEDAEACATEGAFECARAVYGYALSVFP 281
+E GA ST + + IG Q WM AE EG V A+++FP
Sbjct: 784 SEVGGAASTNSDSLNSGIGDAWSKFRTQADVWMCLAELYINEGRHADLTKVIEQAITMFP 843
Query: 282 SK-KSIWLRAAYLEKQHGTRASLETLLQR 365
S ++++L+ L + A ETL+ R
Sbjct: 844 SSPQALYLKGRLLVSRCQKLAD-ETLVSR 871
>Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical
protein C06C3.9 protein.
Length = 217
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 253 CTGTRCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
CTG C+ L GF ++T A CCS PS + + C
Sbjct: 66 CTGLLEGCTGNTWLGGFHVYLLENTTQAAVLDPVCCSSPSVQIDAGSC 113
>Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical
protein C06C3.4 protein.
Length = 421
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 253 CTGTRCPCSRPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRC 396
CTG C+ L GF ++T A CCS PS + + C
Sbjct: 75 CTGLLEGCTGNTWLGGFHVYLLENTTQAAVLDPVCCSSPSVQIDAGSC 122
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 344 PRDAAAAGRRAL--SQVGGAVAHGRQVQVASXATYQRPGVSWSLAFQANPNSEEI 502
P A AA + ++ GGAV+ Q + S A Y W A NSE++
Sbjct: 162 PTQAVAANTHLIYSTEQGGAVSPTPQKSIGSIADYDPMNGQWGTAAAQPRNSEKL 216
>AF099913-3|AAC68750.1| 143|Caenorhabditis elegans Hypothetical
protein C29F9.9 protein.
Length = 143
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 280 RPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSW 408
+P L GF P G A SRR C+ P T+ CG+W
Sbjct: 14 KPARLLGFLPRRKPPKVGSALRSRR-CAAPRDTI---AVCGAW 52
>AF099913-2|AAC68749.1| 254|Caenorhabditis elegans Hypothetical
protein C29F9.8 protein.
Length = 254
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 280 RPRSLSGFAPPTWRSSTGLAPASRRCCSGPSRTVPSRRCCGSW 408
+P L GF P G A SRR C+ P T+ CG+W
Sbjct: 14 KPARLLGFLPRRKPPKVGSALRSRR-CAAPRDTI---AVCGAW 52
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +3
Query: 72 NREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAEACATEGAFECARA 251
N W K A+ + G ++ ++ I + + D TW A+ +G A A
Sbjct: 791 NDSAWLKVAVLCLEMGMINESSRVLEQTIKYNPQNADAWCTW---AQTAHLQGDAHEALA 847
Query: 252 VYGYALSVFPSKKSIWLRAAYL 317
++ AL V P+ ++ + YL
Sbjct: 848 MFRQALFVRPTPAAVVGYSTYL 869
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,730
Number of Sequences: 27780
Number of extensions: 258509
Number of successful extensions: 863
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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