Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0446
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 29 0.88
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.88
SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 27 2.0
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 27 2.0
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 2.7
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 27 3.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 4.7
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 4.7
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 26 4.7
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 26 4.7
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 4.7
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 26 6.2
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 6.2
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 6.2
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.2
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 8.2
SPAC6G9.01c |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 8.2
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 8.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 8.2
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 30.7 bits (66), Expect = 0.22
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +3
Query: 426 AAVVKLMVPKTAYHALPAADHSARSKSVMYQSMTSIPALQP--TSTITNKPALASS--SS 593
AAV ++ +HA + HSA S + Y +P + ST N PAL S S
Sbjct: 587 AAVDVMVAASIVHHAKTSLMHSAASSTPSYNGERIVPDVPSPCISTNPNLPALVGSLDSV 646
Query: 594 SIRYTTGRPQ-PYNNTEDLPTNM 659
++ + G Q Y+ T +PT +
Sbjct: 647 NLHHLLGFIQNTYSTTSYIPTRV 669
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 28.7 bits (61), Expect = 0.88
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 113 PSPSCTGRS*TPPISLGPVAERNTVQLLCSCPPCSHA 3
P P RS TP + P+ +T+QL+ SCPP +++
Sbjct: 33 PLPLTLSRS-TP---INPIIRSDTIQLVISCPPVTYS 65
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.88
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +3
Query: 339 SITRSTIRDLCSNGPGLLTNF*INTVRKAAAVVKLMVPKTAYHALPAADHSARSKSVMYQ 518
S T ST ++ P +++ ++ ++ ++ P T+ + ++ + S S++
Sbjct: 597 SSTSSTFSSASTSSPSSISS----SISSSSTILSSPTPSTSSLMISSSSIISGSSSILSS 652
Query: 519 SMTSIPALQPTST-----ITNKPALASSSSSIRYTTGRPQPYNNTEDLPTN 656
S+++IP ST I + L SSSSS+ + P +++ +P++
Sbjct: 653 SISTIPISSSLSTYSSSVIPSSSTLVSSSSSL-IVSSSPVASSSSSPIPSS 702
>SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = -2
Query: 667 SSGMFVGRSSVLLYGCGLPVVYL-----IELEEDARAGLFV 560
SSG+ + V L+GCG+PV+ L EL D GL V
Sbjct: 333 SSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLIV 373
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 2.0
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 209 LAVFYQTLDTKVPKW 253
+ V+Y+ LDTK+P+W
Sbjct: 834 IIVYYEKLDTKIPQW 848
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 552 STITNKPALASSSSSIRYTTGRPQPYNNTED-LPTNM 659
STITN + SSSS +TT PY NT LP+++
Sbjct: 200 STITNTSMIPSSSS---FTTTTGSPYYNTSSFLPSSV 233
Score = 26.2 bits (55), Expect = 4.7
Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Frame = +3
Query: 216 YSTRPWTPRCRSGSLIVQ*SAVIQVWASGQCQILPTWKVL*SITRSTIRD--LCSNGPGL 389
++T +P + S + S+VI + +LPT + + T T+ L S P
Sbjct: 214 FTTTTGSPYYNTSSFLP--SSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSY 271
Query: 390 LTNF*INTVRKAAAVVKLMVPKTAYHALPAADHSARSKSVM-YQSMTSIPALQPTSTITN 566
TN + T V + +++ + ++ SV + S +S T++ T+
Sbjct: 272 STN--LTTTGSTTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTS 329
Query: 567 KPALASSSSSIRYTTGRPQPYNNTEDLPTNMPEDL 671
+ + S +T+ P Y+N+ +PT++P +
Sbjct: 330 VTYTGTGTGSATFTSSPPF-YSNSSVIPTSVPSSV 363
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Frame = +3
Query: 525 TSIPALQPTSTITNKP---ALASSSSSIRYT---------TGRPQPYNNTEDLPTNMPED 668
TS+P+ + T +N L +S++SI YT T P Y+N+ +PT++P
Sbjct: 357 TSVPSSVSSFTSSNSSYTTTLTASNTSITYTGTGTGSATFTSSPPFYSNSSVIPTSVPSS 416
Query: 669 L 671
+
Sbjct: 417 V 417
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 483 DHSARSKSVMYQSMTSIPALQPTSTITNKPALASSSS 593
D SAR V+ T+IP + +S+I N P A SS
Sbjct: 178 DQSARQHQVLV-GQTAIPTSEASSSINNTPLQAPVSS 213
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 474 PAADHSARSKSVMYQSMTSI-PALQPTSTITNKPALASSSS---SIRYTTGRPQPYNNTE 641
PA +SA S V + I P Q ++ +N PA+++S S ++ T PQP T+
Sbjct: 1260 PAPVNSATSTPVAAPTAQQIQPGKQASAVSSNVPAVSASISTPPAVVPTVQHPQP---TK 1316
Query: 642 DLPTNMPED 668
+PT +D
Sbjct: 1317 QIPTAAVKD 1325
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 468 ALPAADHSARSKSVMYQSMTSIPALQPTSTITNKPALASSSSS 596
+L + ++S S S ++ PAL P ++NKP L S SS
Sbjct: 68 SLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKPPLTWSPSS 110
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 534 PALQPTSTITNKPALASSSSSIRYTTGRPQPYNNTEDLPTNMP 662
PA Q ST T+K +SS+ ++ G+P TED TN P
Sbjct: 275 PAGQAASTATDKGTTTTSSAGTGFSFGKPA---TTED--TNKP 312
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 549 TSTITNKPALASSSSSIRYTTGRPQPYNNTEDLPTNMPEDLKQHIKTLSGKP 704
+++++ P L S+S+I QP++N+ DLP+ + D I ++G P
Sbjct: 185 SASMSVPPPLTPSASTIN-----DQPFSNSFDLPSQVIADGTGAISDINGNP 231
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 486 HSARSKSVMYQSMTSIPALQPTSTITN-KPALASSSSSIRYTTGRPQPYNNTEDLPTNM 659
HS +S+ +M + P + PT + TN PA + +SS + Q Y+ T P +M
Sbjct: 74 HSGQSEKLMSTRTSHSPYISPTMSYTNHSPANLTRNSSFNH-----QHYSTTLRSPPSM 127
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 188 VGFFAALLAVFYQTLDTKVPKWQLDSSIIG 277
VGFF ++L ++ D V ++ +IIG
Sbjct: 293 VGFFVSVLDALFECFDVPVVQYMYQENIIG 322
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.8 bits (54), Expect = 6.2
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Frame = +2
Query: 233 DTKVPKWQLDSSIIGSNPGLGFRPMPDTA-----NVESTLIYYKVNDKGSVLKWARVIDE 397
+ K+P S + NP + +P DT N E+ L+ + SV A V +
Sbjct: 1023 EIKLPSDTASSKVDTHNPTVT-QPTDDTGGLNSYNTENPLLTNNTLEPSSVE--AIVSSK 1079
Query: 398 FLNQYRKKGSGSGEAHGAENRVPCSPSSGPLGEKQVCDVPVD-DFNPCTP----ANQYNY 562
+++ K+ G A +RV + ++ G + D T A + +Y
Sbjct: 1080 DSDKHAKESKGKSLAPLISSRVSTNDTTNVAGIRSQRSFTTHIDLKKLTTRQNGAKKSSY 1139
Query: 563 EQAGPCVFLKLNKIYNWEAAA 625
PCV LNKIY EAAA
Sbjct: 1140 TGTNPCVLNYLNKIYA-EAAA 1159
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 6.2
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 432 VVKLMVPKTAYHALPAA-DHSARSKSVMYQSMTSIPALQPTSTITNKPALASSSSSIRYT 608
VVK + T H+L + + + S+S T P Q + N PA+ S+ T
Sbjct: 425 VVKFIEKNTQGHSLESKKEPNLESQSSNKIKTTIFPVSQLLFSNANVPAMCQRLRSLNNT 484
Query: 609 TGRPQPYNNTEDL 647
P P + + L
Sbjct: 485 KSNPLPAKSIDSL 497
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.2
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +3
Query: 414 VRKAAAVVKLMVPKTAYHALPAADHSARSKSVMYQSMTSIPALQPTSTITNKPALASSSS 593
+R A V L T ALP A + + +T + T +T P SSSS
Sbjct: 1 MRTTFATVALAFLSTV-GALPYAPNHRHHRRDDDGVLTVYETILETVYVTAVPGANSSSS 59
Query: 594 SIRYTTGRPQPYNNTED-LPTNMPEDLKQHIKTLSGKPDANT 716
Y+TG +++D T +P + + + P A++
Sbjct: 60 YTSYSTGLASVTESSDDGASTALPTTSTESVVVTTSAPAASS 101
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 491 GEKQVC-DVPVDDFNPCTPA---NQYNYEQAGPCVFL 589
G K VC DV ++D + C N Y Y + PCV +
Sbjct: 195 GTKLVCSDVLLNDDSNCPSKKGINNYQYPRTDPCVIM 231
>SPAC6G9.01c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 95
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 510 MYQSMTSIPALQPTSTITNKPALASSSSSIRYTTGRPQPYNNTEDL 647
++ S + PA + ++ ++ + + T RP+P NN +DL
Sbjct: 6 IFASKKANPANEKSNDSKSEAKAPKKGAKTKSTPSRPKPTNNQDDL 51
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +3
Query: 519 SMTSIPALQPTSTITNKPALASSSSSIRYTTGRPQPYNNTEDLPTNMPEDLKQHIKTLSG 698
S P+ T+KP L ++SS+ +NT P+ + H T+S
Sbjct: 717 STPRFPSFTSNGITTDKPTLPDTTSSVPTQHNSFDAMHNTLRSPSLNSNNSSAHASTVSR 776
Query: 699 KPDAN 713
P N
Sbjct: 777 NPFHN 781
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 480 ADHSARSKSVMYQSMTSIPALQPTSTITNKPALASSSSSIRYTTGRPQPYNNTE 641
+ +S+ S S TSI + +S+ T+ P+++S +SS +G YN T+
Sbjct: 807 SSYSSPISSNSVTSSTSIISSIASSSYTSIPSISSIASSFFDASGFTSIYNGTK 860
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,784
Number of Sequences: 5004
Number of extensions: 67453
Number of successful extensions: 273
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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