Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0445
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 350 1e-97
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 329 3e-91
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 271 8e-74
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 187 1e-48
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 186 2e-48
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 178 8e-46
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 177 2e-45
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 175 6e-45
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 171 9e-44
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 134 2e-32
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 30 0.31
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 30 0.41
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.72
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.72
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.2
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 27 3.8
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 5.0
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 5.0
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 26 5.0
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 6.7
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 25 8.8
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 350 bits (860), Expect = 1e-97
Identities = 154/186 (82%), Positives = 175/186 (94%)
Frame = +2
Query: 143 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 322
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF+SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 323 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 502
HGQYYDLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 503 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 682
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+DEKIF HGGLSPDL +M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 683 IRRIMK 700
I+RIM+
Sbjct: 185 IQRIMR 190
Score = 46.0 bits (104), Expect = 6e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
RPTDVPD GLLCDLLWSDP
Sbjct: 190 RPTDVPDTGLLCDLLWSDP 208
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 329 bits (808), Expect = 3e-91
Identities = 145/186 (77%), Positives = 167/186 (89%)
Frame = +2
Query: 143 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 322
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IFLSQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 323 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 502
HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 503 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 682
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+PVAA++DEKIFC HGGLSPDL +++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 683 IRRIMK 700
I+RI++
Sbjct: 182 IQRIIR 187
Score = 44.4 bits (100), Expect = 2e-05
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
RPTD+PD GLLCDL+WSDP
Sbjct: 187 RPTDIPDTGLLCDLVWSDP 205
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 271 bits (664), Expect = 8e-74
Identities = 124/184 (67%), Positives = 144/184 (78%), Gaps = 1/184 (0%)
Frame = +2
Query: 146 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 322
LN+D +I++L+ V K +V L EI +C+ REIFLSQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 323 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 502
HGQY DL+RLFE GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 503 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 682
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLP+A++V KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 683 IRRI 694
IR I
Sbjct: 370 IREI 373
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
RPTDVPD GLL DLLWSDP
Sbjct: 375 RPTDVPDYGLLNDLLWSDP 393
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 187 bits (456), Expect = 1e-48
Identities = 75/159 (47%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
Frame = +2
Query: 215 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 394
L+E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 395 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 571
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIR 688
W+ FTD F+ LP+ A+++++IFC HGGLSP + ++ +R
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVR 181
Score = 33.1 bits (72), Expect = 0.044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
R +VP +G +CDLLWSDP
Sbjct: 185 RVQEVPHEGPICDLLWSDP 203
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 186 bits (454), Expect = 2e-48
Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
Frame = +2
Query: 215 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 394
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 395 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 571
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRI 694
WK FT+ F+ P+ A+++++IFC HGGLSP + +++ +R +
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTL 196
Score = 33.1 bits (72), Expect = 0.044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
R +VP +G +CDLLWSDP
Sbjct: 198 RVQEVPHEGPMCDLLWSDP 216
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 178 bits (433), Expect = 8e-46
Identities = 83/181 (45%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Frame = +2
Query: 146 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 325
+++DN+I++L + + + E I LC ++E+ + + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 326 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 505
GQ+ DLL +F GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 506 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 682
I + YGFY EC R+Y N +WK FTD F+ L ++A +D+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 683 I 685
I
Sbjct: 174 I 174
Score = 25.4 bits (53), Expect = 8.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 708 DVPDQGLLCDLLWSDP 755
+ P +G + DL+WSDP
Sbjct: 182 EFPHEGPMADLVWSDP 197
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 177 bits (430), Expect = 2e-45
Identities = 80/161 (49%), Positives = 111/161 (68%)
Frame = +2
Query: 212 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 391
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 392 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 571
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRI 694
++ FN LP+AAI++++ C HGGLSP+L + IR I
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMI 244
Score = 31.9 bits (69), Expect = 0.10
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 714 PDQGLLCDLLWSDP 755
P GL+CDLLWSDP
Sbjct: 251 PTHGLMCDLLWSDP 264
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 175 bits (426), Expect = 6e-45
Identities = 76/159 (47%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Frame = +2
Query: 215 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 394
L E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 395 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 571
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIR 688
WK F+ L +AA++D KI C HGGLSP+++ ++QIR
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIR 175
Score = 31.9 bits (69), Expect = 0.10
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
R ++P +G CDL+WSDP
Sbjct: 179 RAQEIPHEGSFCDLMWSDP 197
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 171 bits (416), Expect = 9e-44
Identities = 76/159 (47%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Frame = +2
Query: 215 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 394
+ E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 395 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 571
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANV 138
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIR 688
W+ + F+ L + A+VD K+FC HGGLSP + +++QIR
Sbjct: 139 WRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIR 177
Score = 34.3 bits (75), Expect = 0.019
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
R +VP +G +CDLLWSDP
Sbjct: 181 RKQEVPHEGAMCDLLWSDP 199
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 134 bits (323), Expect = 2e-32
Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 6/153 (3%)
Frame = +2
Query: 254 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 418
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 419 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 598
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 599 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIRRI 694
LP+ +++ + HGGL S D ++Q+R I
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNI 344
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.3 bits (65), Expect = 0.31
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 381 DSGGKPPYSNNLKRS*YCPCMSPQIFKGASSSSSIGCDKNISLDFKHSPL-ISISVN*TF 205
DS PP + + P P I ++SSS + NIS + + S + S+S N
Sbjct: 157 DSVNSPPSYGIMASATNQPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVL 216
Query: 204 IPGFSPRTFSNFFITLSMFNSSVSLSAIGY 115
P SP++ S + +S N VS +A Y
Sbjct: 217 DPA-SPKSVSPDLVYVSSDNPPVSTAASAY 245
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.41
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 101 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQP 277
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ + P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 278 ILLELEAPLKICGD 319
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 587 DCFNCLPVAAIVDEKIFCC-HGGLSPD 664
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 224 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 385
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 386 YLFLGDYVDRGKQSLETICL 445
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 179 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 39
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 664 PASYGTDPADHEGRQTCPTRACSATCS 744
P SY T+ +D E C T AC+ +CS
Sbjct: 37 PLSYKTETSDKE---LCQTAACATSCS 60
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 464 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 607
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 321 MSPQIFKGASSSSSIGCDKNISLD 250
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 481 EILGIFNLVGEEQAYCFQGLLATVHIVSKEEIVG 380
EIL I + E C QGL IV KE VG
Sbjct: 258 EILEILDTAEETLRSCIQGLNIDAKIVRKERSVG 291
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 365 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 469
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 321 MSPQIFKGASSSSSIGCDKNISLDFKHSPLISISVN*TFIPGFSPRTFS 175
+SP F + +I +++SL K P+++ S + + PGFS TF+
Sbjct: 266 ISPASFGSGIRTRNIFNPESMSLGLK-PPILNRSYSASMAPGFSMNTFT 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,160,208
Number of Sequences: 5004
Number of extensions: 67865
Number of successful extensions: 208
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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