Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0445
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41) 353 7e-98
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25) 165 3e-41
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 1e-26
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07) 102 4e-22
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15) 77 1e-14
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68) 61 1e-09
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16) 44 1e-04
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16) 43 2e-04
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 29 4.1
SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028) 29 5.4
SB_14102| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0024) 29 5.4
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 28 7.1
SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7) 28 9.4
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 28 9.4
>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
Length = 293
Score = 353 bits (869), Expect = 7e-98
Identities = 156/172 (90%), Positives = 167/172 (97%)
Frame = +2
Query: 134 DTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKIC 313
+ ++LN+D++I +LL+VRG +PG NVQLTE EI+GLCLKSREIFLSQPILLELEAPLKIC
Sbjct: 3 EPEKLNVDSIISRLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKIC 62
Query: 314 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 493
GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
Sbjct: 63 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 494 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHG 649
GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+DEKIFCCHG
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAILDEKIFCCHG 174
>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
Length = 173
Score = 165 bits (401), Expect = 3e-41
Identities = 74/157 (47%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Frame = +2
Query: 215 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 394
L E ++K LC E+ L + + + +P+ +CGDIHGQ+YDL LF GG P ++Y+F
Sbjct: 17 LPENDLKKLCDYVCELLLEESNVQPVSSPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVF 76
Query: 395 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 571
+GD+VDRG SLET LL K K+P+ LLRGNHE I ++YGFYDEC+ +Y N
Sbjct: 77 MGDFVDRGYYSLETFTRLLTLKAKWPDRITLLRGNHESRQITQVYGFYDECQSKYGNANA 136
Query: 572 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 682
W+ F+ L VAAI+D ++ C HGGLSPD++ ++Q
Sbjct: 137 WRYCCKVFDLLTVAAIIDGQVLCVHGGLSPDIKTIDQ 173
>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 117 bits (281), Expect = 1e-26
Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 32/177 (18%)
Frame = +2
Query: 260 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 439
I + +LE++AP+ +CGDIHGQ+YDL++LFE GG P + YLFLGDYVDRG S+E
Sbjct: 69 ILRKEKTMLEVDAPITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIE-- 126
Query: 440 CLLLAYKIKYPENFFLLRGNHECASINRIYGF---------------------YDECKR- 553
CL Y FLLRGNHEC + + F Y C R
Sbjct: 127 CL-------YTNTLFLLRGNHECRHLTEYFTFKTESANFLDYITAREKMSPKQYINCARV 179
Query: 554 -RYNIKLWK------TFTDC---FNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRI 694
Y +K K + C F+CLP+AA+++++ C HGGLSP++ ++ ++++
Sbjct: 180 THYTLKSGKIKYSEAVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDVKKL 236
>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 116 bits (278), Expect = 3e-26
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = +2
Query: 146 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 325
L++DNVI++LL + + PG VQL E +I+ +C SREIFL QP+LLE+ AP+ I GDIH
Sbjct: 10 LDVDNVIEQLLSYK-KNPGKQVQLPEAQIRQICQVSREIFLQQPMLLEIGAPINIFGDIH 68
Query: 326 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 424
GQY DLLR F+ G+PP +Y+FLGDYVDR K+
Sbjct: 69 GQYEDLLRHFDKLGYPPNESYIFLGDYVDRPKR 101
>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
Length = 199
Score = 102 bits (244), Expect = 4e-22
Identities = 42/83 (50%), Positives = 62/83 (74%)
Frame = +2
Query: 212 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 391
QLTE ++K LC K++EI + + E++ P+ +CGD+HGQ++DL+ LF GG P++NYL
Sbjct: 23 QLTEAQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 82
Query: 392 FLGDYVDRGKQSLETICLLLAYK 460
F+GDYVDRG S+ET+ LL+ K
Sbjct: 83 FMGDYVDRGYYSVETVTLLVTLK 105
>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
Length = 417
Score = 77.4 bits (182), Expect = 1e-14
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Frame = +2
Query: 365 GFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN-RIYGFY 538
G P PE+ Y+F GD VDRG +S+E +L A+ I YP ++ RGNHE +N RI
Sbjct: 2 GLPSPENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHEDHIMNLRIIVTK 61
Query: 539 DECKRRY---NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLS--PDLQAMEQIRR 691
K +Y ++ +TF LP+A IV+ KIF HGG+S DL +E+I R
Sbjct: 62 AGGKDQYKDSRSEIIRTFRKYLGWLPLATIVNNKIFVAHGGISNITDLDIIERIDR 117
>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
Length = 720
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Frame = +2
Query: 239 LCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLL----RLFEYGGFPPESNYLFLGDY 406
+C RE+ + +P +L +++P+ + GD+HG + DL+ L+ G SN+LFLGDY
Sbjct: 652 VCRSLREVVMEEPRMLRVQSPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDY 711
Query: 407 VDRGKQSLE 433
VDRG+ +E
Sbjct: 712 VDRGENGVE 720
>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
RPTDVPD GLLCDLLWSDP
Sbjct: 64 RPTDVPDTGLLCDLLWSDP 82
>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
Length = 250
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +2
Query: 308 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 487
+ GDIHG L +LFE +FLGDYVD +S TI L+ +I +
Sbjct: 7 VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLI--EIAEKHDCIF 64
Query: 488 LRGNHE 505
++GNH+
Sbjct: 65 IKGNHD 70
>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
Length = 465
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 699 RPTDVPDQGLLCDLLWSDP 755
RP DVPD+GL+CDLLWSDP
Sbjct: 116 RPMDVPDKGLVCDLLWSDP 134
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 29.1 bits (62), Expect = 4.1
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = +2
Query: 65 SLFFYLFYSTIFRTHTIYPMADRDTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEI---- 232
SLF LF + H Y +AD+ T ++N + V L + G+ ++ T I +
Sbjct: 443 SLFSPLFDKIVEHYHAPYKLADKHTSDMNPEKVTAPNL----DPDGVFIRSTRIRVARNL 498
Query: 233 KGLCLKSREIFLSQPILLELEAPLKIC---GDIHGQYYDLLRLFE 358
KG L + + + +E + +C GD+ G+YY L + E
Sbjct: 499 KGYAL-TPGLTRKERNEIEKKVTEVLCSLTGDLAGKYYPLTGMDE 542
>SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028)
Length = 128
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 449 GAGILFPRTACHGPHSLQGRDSWTPEGSHHTQTTLR 342
G+ L+P+ +C G SL +DS + S T LR
Sbjct: 67 GSKFLYPKASCEGIQSLPSQDSKYEKFSEFNDTVLR 102
>SB_14102| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0024)
Length = 515
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +2
Query: 374 PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 553
P Y+ L D D K ++++ + K+K+ E+F EC S + + +EC R
Sbjct: 405 PSRKYVSLRDTRDHRKVAMDSKSDIS--KLKWAEDFNF-ENPEECDS-DFNFENPEECVR 460
Query: 554 RYNIKLWKTFTDCFNCLPV 610
N +LW F C+ V
Sbjct: 461 TLNDRLWNLFDQSSPCIKV 479
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 410 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 511
D KQS T+C+LL Y+ KY E + + N EC+
Sbjct: 444 DTTKQSRRTVCMLL-YRAKYIEGCY-ISVNTECS 475
>SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7)
Length = 519
Score = 27.9 bits (59), Expect = 9.4
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = +2
Query: 602 LPVAAIVDEKIFCCHG 649
+P++ ++D+++FCC G
Sbjct: 71 VPISVVLDDRVFCCQG 86
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 519 IGFMGFTMSAKGGITLNYGRRSQTAS 596
+G GF + K G+T NYG Q S
Sbjct: 160 VGIFGFLATGKNGVTGNYGMLDQVKS 185
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,759,925
Number of Sequences: 59808
Number of extensions: 500682
Number of successful extensions: 1432
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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