Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0444
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   0.95 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   0.95 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   0.95 
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   0.95 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   0.95 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   2.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.8  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 YFCYDNVSFFEAEIEMAKYRLPQPS 266
           +FC+  + + +  I   +++ PQP+
Sbjct: 26  FFCFHGIPYAKPPIGPLRFKAPQPA 50


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 YFCYDNVSFFEAEIEMAKYRLPQPS 266
           +FC+  + + +  I   +++ PQP+
Sbjct: 26  FFCFHGIPYAKPPIGPLRFKAPQPA 50


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 YFCYDNVSFFEAEIEMAKYRLPQPS 266
           +FC+  + + +  I   +++ PQP+
Sbjct: 26  FFCFHGIPYAKPPIGPLRFKAPQPA 50


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 YFCYDNVSFFEAEIEMAKYRLPQPS 266
           +FC+  + + +  I   +++ PQP+
Sbjct: 26  FFCFHGIPYAKPPIGPLRFKAPQPA 50


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 192 YFCYDNVSFFEAEIEMAKYRLPQPS 266
           +FC+  + + +  I   +++ PQP+
Sbjct: 25  FFCFHGIPYAKPPIGPLRFKAPQPA 49


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 131 SWMNDGATQSID 96
           SWMND A Q I+
Sbjct: 360 SWMNDEAQQEIN 371


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 175 APVFFGSTPGPTGCEAG*MT 116
           AP   G TPG    EAG M+
Sbjct: 779 APASGGGTPGKYTAEAGFMS 798



 Score = 20.2 bits (40), Expect = 6.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 270 GPKVVAIGTSPSQFQLRRSSHYHNRNILELCT 175
           G KVV   T+ SQ++++         I +LCT
Sbjct: 86  GYKVVCYYTNWSQYRVKIGKFTPEHIIPDLCT 117


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 148 PVWIQKKPERTKFQNISVMIM*ASS 222
           PV++++ P R  F N +  ++  S+
Sbjct: 23  PVFVREPPNRIDFSNTTGAVVECSA 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,236
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)