Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0444
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99726-1|CAB56704.1| 108|Homo sapiens mitochondrial NADH-Ubiqui... 36 0.029
CR542190-1|CAG46987.1| 108|Homo sapiens NDUFV3 protein. 36 0.029
CR542174-1|CAG46971.1| 108|Homo sapiens NDUFV3 protein. 36 0.029
BC054016-1|AAH54016.1| 108|Homo sapiens NADH dehydrogenase (ubi... 36 0.029
BC033766-1|AAH33766.1| 108|Homo sapiens NADH dehydrogenase (ubi... 36 0.029
AB038163-1|BAB13732.1| 108|Homo sapiens NADH-Ubiquinone oxidore... 36 0.029
BC021217-1|AAH21217.2| 473|Homo sapiens NADH dehydrogenase (ubi... 34 0.12
AK056041-1|BAB71080.1| 456|Homo sapiens protein ( Homo sapiens ... 34 0.12
AY173949-1|AAO49719.1| 112|Homo sapiens mitochondrial NADH oxid... 34 0.15
>X99726-1|CAB56704.1| 108|Homo sapiens mitochondrial
NADH-Ubiquinone oxidoreductase 10-kDa subunit protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>CR542190-1|CAG46987.1| 108|Homo sapiens NDUFV3 protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>CR542174-1|CAG46971.1| 108|Homo sapiens NDUFV3 protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>BC054016-1|AAH54016.1| 108|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 3, 10kDa protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>BC033766-1|AAH33766.1| 108|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 3, 10kDa protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>AB038163-1|BAB13732.1| 108|Homo sapiens NADH-Ubiquinone
oxidoreductase protein.
Length = 108
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 126 PASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
P +P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 54 PPKKPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 101
>BC021217-1|AAH21217.2| 473|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 3, 10kDa protein.
Length = 473
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 135 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
+P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 422 EPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 466
>AK056041-1|BAB71080.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ31479 fis, clone NT2NE2001634, moderately
similar to NADH-UBIQUINONE OXIDOREDUCTASE 9 KD SUBUNIT
PRECURSOR ).
Length = 456
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 135 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
+P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 405 EPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 449
>AY173949-1|AAO49719.1| 112|Homo sapiens mitochondrial NADH
oxidoreductase-like protein protein.
Length = 112
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 135 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
+P +P YK ++ Y +F + +E++K+R+PQPS+
Sbjct: 61 KPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSS 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,730,234
Number of Sequences: 237096
Number of extensions: 1006867
Number of successful extensions: 1798
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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