Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0444
         (359 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071731-1|AAL49353.1|  109|Drosophila melanogaster RH44935p pro...    73   1e-13
AE014298-1595|AAF48031.1|  109|Drosophila melanogaster CG11752-P...    73   1e-13
BT023610-1|AAY85010.1|  128|Drosophila melanogaster IP06419p pro...    27   7.2  
AE013599-1755|AAF58346.1|  125|Drosophila melanogaster CG12464-P...    27   7.2  
AY118863-1|AAM50723.1|   77|Drosophila melanogaster GM24338p pro...    27   9.5  
AE014296-692|AAN11570.1|   77|Drosophila melanogaster CG32266-PA...    27   9.5  

>AY071731-1|AAL49353.1|  109|Drosophila melanogaster RH44935p
           protein.
          Length = 109

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = +3

Query: 96  VNGLSSAVIHPASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
           V GL+S  + P+S PVGPG     TG YKVPEY+ ++  S+ EAE+EMAKYR PQPSA
Sbjct: 52  VVGLTSNCVKPSSGPVGPGASA--TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSA 107


>AE014298-1595|AAF48031.1|  109|Drosophila melanogaster CG11752-PA
           protein.
          Length = 109

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = +3

Query: 96  VNGLSSAVIHPASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSA 269
           V GL+S  + P+S PVGPG     TG YKVPEY+ ++  S+ EAE+EMAKYR PQPSA
Sbjct: 52  VVGLTSNCVKPSSGPVGPGASA--TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSA 107


>BT023610-1|AAY85010.1|  128|Drosophila melanogaster IP06419p
           protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFE 224
           + +GP    K+T  YK PEY+ Y   S++E
Sbjct: 85  EQLGPKAGKKQT--YKNPEYYSYYRYSYYE 112


>AE013599-1755|AAF58346.1|  125|Drosophila melanogaster CG12464-PA
           protein.
          Length = 125

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFE 224
           + +GP    K+T  YK PEY+ Y   S++E
Sbjct: 82  EQLGPKAGKKQT--YKNPEYYSYYRYSYYE 109


>AY118863-1|AAM50723.1|   77|Drosophila melanogaster GM24338p
           protein.
          Length = 77

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 283 IYFLRAEGCGNRYFAISISA-SKKLTLS*QKYSGTLYAPVF 164
           ++ L A  CG   F  + SA S  +  +   YSG LYAP +
Sbjct: 9   LFALLAVACGKPQFLTAYSAASPVVAATPYAYSGGLYAPTY 49


>AE014296-692|AAN11570.1|   77|Drosophila melanogaster CG32266-PA
           protein.
          Length = 77

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 283 IYFLRAEGCGNRYFAISISA-SKKLTLS*QKYSGTLYAPVF 164
           ++ L A  CG   F  + SA S  +  +   YSG LYAP +
Sbjct: 9   LFALLAVACGKPQFLTAYSAASPVVAATPYAYSGGLYAPTY 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,219,442
Number of Sequences: 53049
Number of extensions: 291932
Number of successful extensions: 655
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)