Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0443
(588 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 26 0.79
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 26 1.0
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 26 1.0
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 1.8
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 1.8
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 2.4
AF515527-1|AAM61894.1| 211|Anopheles gambiae glutathione S-tran... 23 5.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 7.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 7.3
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 7.3
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 7.3
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 9.7
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 26.2 bits (55), Expect = 0.79
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = -2
Query: 434 LQQNRMAIRKVMGEDTARQLVPGTRAPRSGDTAALRPPPPG---PASSAT 294
+ Q ++A+ + + PGT P + A P PP P S+ T
Sbjct: 46 VHQQQLALEQQSAAISTNTAAPGTAGPNAATVTAATPQPPAASMPPSTTT 95
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 25.8 bits (54), Expect = 1.0
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +1
Query: 430 CRYGV----STGSSPYPGANIWVHQIFGY 504
C YG +T PY G NI + Q FGY
Sbjct: 114 CNYGHDRCRATKKFPYAGQNIAITQFFGY 142
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 25.8 bits (54), Expect = 1.0
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +1
Query: 430 CRYGV----STGSSPYPGANIWVHQIFGY 504
C YG +T PY G NI + Q FGY
Sbjct: 114 CNYGHDRCRATKKFPYAGQNIAITQFFGY 142
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 25.0 bits (52), Expect = 1.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 577 LERWATQRWWSWRTRKRETG 518
+E RWW WR R TG
Sbjct: 1 MEPLPQSRWWRWRRRHLLTG 20
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 1.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 268 QQSIRTMAQVAELAGPGGGGRSAAVSPLRGARVP 369
+Q I + AE GGG +S LRG+RVP
Sbjct: 355 RQQIDALIDTAE-DNEFGGGYRVVMSTLRGSRVP 387
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.6 bits (51), Expect = 2.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 211 VECEATLTTLGGAHQHAQDDACDSHESAGDNANWSEDSRVPGESNT 74
+E +A GG + + DD+ D +GDN + + G T
Sbjct: 2020 LEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGT 2065
>AF515527-1|AAM61894.1| 211|Anopheles gambiae glutathione
S-transferase D10 protein.
Length = 211
Score = 23.4 bits (48), Expect = 5.5
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +1
Query: 439 GVSTGSSPYPGANIWVHQIFGYIKRSGQF 525
G+ + +PG WV ++ G + G+F
Sbjct: 168 GIKYDLAAFPGITAWVARVTGELPDYGEF 196
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.0 bits (47), Expect = 7.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 11 VLTAAS-YRGCGENEEPDHYAARIAFTGNSRVLGPVCIVAGALMTIA 148
V+ A+S YR G P HY A + G + + GA+ TIA
Sbjct: 108 VINASSEYRINGSVVSPQHYLAELEKIGINVKAKNFLVFQGAVETIA 154
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 215 PIHGDFYPLSPQNTRKYTNS 274
P H F P + Q+ RK+T++
Sbjct: 126 PTHSHFQPTAVQDLRKWTST 145
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 215 PIHGDFYPLSPQNTRKYTNS 274
P H F P + Q+ RK+T++
Sbjct: 127 PTHSHFQPTAVQDLRKWTST 146
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.0 bits (47), Expect = 7.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 178 GAHQHAQDDACDSHESAGDNANWSEDSRVPGESNTGSVVVGLF 50
G Q Q DS S+ +++ S+D E N VG+F
Sbjct: 34 GQPQRQQVQRSDSDSSSSESSQSSDDDSGSVERNPAIQPVGIF 76
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 22.6 bits (46), Expect = 9.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 356 PRSGDTAALRPPPPGPASSAT 294
P S D PPPP PAS ++
Sbjct: 670 PSSRDRPKDLPPPPIPASGSS 690
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,619
Number of Sequences: 2352
Number of extensions: 11427
Number of successful extensions: 45
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -