Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0436
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 253 9e-68
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 246 7e-66
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 244 3e-65
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 242 2e-64
03_01_0034 + 318432-318825,318902-319851 89 2e-18
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 88 5e-18
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 88 5e-18
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 87 7e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 9e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 87 9e-18
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 87 1e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 84 7e-17
04_03_0664 + 18501248-18502802,18503370-18505054 34 0.070
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 34 0.093
03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508 31 0.86
01_07_0225 - 42126650-42127020,42127057-42127150,42127229-421275... 31 0.86
02_02_0238 + 8163922-8164362,8165008-8165118,8165205-8165249,816... 29 2.0
03_05_1029 - 29835389-29835979 29 3.5
02_05_1004 + 33444248-33444847 29 3.5
01_06_1014 - 33810112-33811995 29 3.5
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 28 4.6
11_08_0084 + 28260647-28262575 28 4.6
07_01_0211 + 1568646-1568716,1568722-1569085 28 4.6
06_01_0241 - 1827161-1827624,1829688-1829828,1830566-1830593,183... 28 4.6
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 4.6
01_01_0790 + 6135910-6136045,6136316-6136497,6136604-6136749,613... 28 4.6
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 28 6.1
07_01_0072 - 525351-525494,526029-526256,526345-526458,527616-52... 28 6.1
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 28 6.1
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 28 6.1
01_04_0043 + 15375459-15377606 28 6.1
03_05_0257 + 22439915-22440275,22440280-22440627,22440962-224410... 27 8.0
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 253 bits (619), Expect = 9e-68
Identities = 107/125 (85%), Positives = 119/125 (95%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGF
Sbjct: 292 TNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVG + + E D+ +Y
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGADDENDDGEDY 450
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 246 bits (603), Expect = 7e-66
Identities = 103/125 (82%), Positives = 118/125 (94%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E ++R+DHKFDLMY+KRAFVHWYVGE
Sbjct: 352 KCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGE-LDEENEY 481
EFSEAREDLAALEKDYEEVG +S E E D+ +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGAESDENEDGDDGDEY 451
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 244 bits (598), Expect = 3e-65
Identities = 103/125 (82%), Positives = 118/125 (94%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGE
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/35 (74%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEG-ELDEENEY 481
EFSEAREDLAALEKDYEEVG + +G E DE +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGSEFDDGDEGDEGDEY 451
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 242 bits (592), Expect = 2e-64
Identities = 102/125 (81%), Positives = 116/125 (92%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ +IKT+RT+QFVDWCPTGF
Sbjct: 373 TNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGF 432
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGE
Sbjct: 433 KCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGE 492
Query: 363 GMEEG 377
GMEEG
Sbjct: 493 GMEEG 497
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVG + E + +E+ EY
Sbjct: 498 EFSEAREDLAALEKDYEEVGAE-VEDDDEEQGEY 530
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/124 (32%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 87.8 bits (208), Expect = 5e-18
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KSSVCDIPP--------RGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 87.8 bits (208), Expect = 5e-18
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KSSVCDIPPN--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 87.4 bits (207), Expect = 7e-18
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KSSVCDIPP--------IGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/124 (31%), Positives = 66/124 (53%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 311 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 370
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 371 KSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 422
Query: 363 GMEE 374
GM+E
Sbjct: 423 GMDE 426
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/124 (31%), Positives = 66/124 (53%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/124 (31%), Positives = 66/124 (53%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 470 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 529
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GE
Sbjct: 530 KSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 581
Query: 363 GMEE 374
GM+E
Sbjct: 582 GMDE 585
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/124 (30%), Positives = 65/124 (52%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 306 TQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNV 365
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY E
Sbjct: 366 KSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSE 417
Query: 363 GMEE 374
GM+E
Sbjct: 418 GMDE 421
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 34.3 bits (75), Expect = 0.070
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -2
Query: 110 VLRHNVSSVQHTTSHVFSMTRVTFHHLVGGLEA 12
+LR N+S+++H + + + R+++HHL L+A
Sbjct: 416 MLRENISNIEHNSEGIMKILRLSYHHLAPHLQA 448
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 33.9 bits (74), Expect = 0.093
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +3
Query: 60 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 188
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
>03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508
Length = 234
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 358 PTYQCTNARLAYIKSNLWSNLAHASAMAVVLDNMH 254
P Y+ N R+ Y+KSN W H A + ++D +H
Sbjct: 110 PNYKIENYRVLYLKSNCW----HEGASSEIIDAIH 140
>01_07_0225 -
42126650-42127020,42127057-42127150,42127229-42127523,
42127604-42127809,42127898-42127945,42128078-42128296
Length = 410
Score = 30.7 bits (66), Expect = 0.86
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 174 LGTSPRTGWFSWF*WL 127
LGT+P+TGW W W+
Sbjct: 271 LGTAPQTGWMEWLEWM 286
>02_02_0238 +
8163922-8164362,8165008-8165118,8165205-8165249,
8166066-8166138,8166215-8166327,8166430-8166489,
8167287-8167334,8167422-8167490,8167618-8167679,
8167771-8167828
Length = 359
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 386 SEAREDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLGRKEPNSYRYLKST 556
+EA + +E EE E E +EE EY S M+ ++ + P + ++ S+
Sbjct: 26 AEAEAKVVDVEGKEEEEEAAKVEEEEEEEREYKSDMRKLEELMSKLNPRAQEFVPSS 82
>03_05_1029 - 29835389-29835979
Length = 196
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 50 ASWKIHGLLYAVQRRRCAEGRECG 121
ASW G YA CA G++CG
Sbjct: 130 ASWVAQGRYYAHANNSCAPGQQCG 153
>02_05_1004 + 33444248-33444847
Length = 199
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 56 WKIHGLLYAVQRRRCAEGRECGY 124
W G+ Y+ CA GRECG+
Sbjct: 135 WAAEGVDYSYAANACAAGRECGH 157
>01_06_1014 - 33810112-33811995
Length = 627
Score = 28.7 bits (61), Expect = 3.5
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +3
Query: 327 AKRAFVHWYVGEGM 368
+KRA +HW++GEG+
Sbjct: 187 SKRAMIHWWIGEGL 200
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 386 SEAREDLAALEKDYEEVGVDSTEGELDEENE 478
SE ED + +E D EE + EGE+D+E +
Sbjct: 78 SEGDEDDSEVEDDSEEDDKEVVEGEIDDEED 108
>11_08_0084 + 28260647-28262575
Length = 642
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 320 QVELVVQSGPRLGD-GGCVGQHAHGALHLGEVSAR 219
Q E+VV LG GG HAHGA++ +V+ R
Sbjct: 155 QGEVVVDGHGMLGGVGGAAAAHAHGAINSKKVNCR 189
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 310 LWSNLAHASAMAVVLDNMHTARCTLARSPPGTTVG 206
+WSN VV DN H T SPPG G
Sbjct: 106 VWSNSTAIGCARVVCDNSHGVFITCNYSPPGNYNG 140
>06_01_0241 -
1827161-1827624,1829688-1829828,1830566-1830593,
1830639-1830728
Length = 240
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 108 PSAQRLLCTAYNKPCIFHDAGHISPSGWRAR 16
P+ RL+ +N CIFH G + S ++ R
Sbjct: 28 PAMTRLIVNHFNDTCIFHSLGAATESHYKRR 58
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = +3
Query: 36 VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 140
++C PR+ +Y++C L ++P+ +N+++ ++ T
Sbjct: 737 IRCSPRYLRYLSCGQL---SILPRWINSSLLSLST 768
>01_01_0790 +
6135910-6136045,6136316-6136497,6136604-6136749,
6136836-6137103,6137256-6137558,6137657-6137905
Length = 427
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 163 STNWMVLLVLMVAIAAFTSFGTTSPLYSIQQA-MYFP 56
S+ +++L++ V + FTSF TT PL++ A M +P
Sbjct: 375 SSEVLIILLVCVIMGLFTSFRTTFPLWTCLVAYMLYP 411
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEG---ELDEENEY 481
E+SE+ + + E + E++ T+G ELDEE+EY
Sbjct: 602 EYSESEREESEYETEGEDIEHSPTQGREDELDEEDEY 638
>07_01_0072 -
525351-525494,526029-526256,526345-526458,527616-527747,
529086-529265,529376-529507,529879-530055,530536-530718,
530894-530938,531192-531306,531770-532128,532700-532939
Length = 682
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEG---ELDEENEY 481
E+SE+ + + E + E++ T+G ELDEE+EY
Sbjct: 583 EYSESEREESEYETEGEDIEHSPTQGREDELDEEDEY 619
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 75 NKPCIFHDAGHISPSGWRARSTRWC 1
NK I+ D G ISP G A +TR C
Sbjct: 479 NKTPIYGDNGSISPGGTPAMTTRGC 503
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 398 EDLAALEKDYEEVGVDSTEGELDEENE 478
E+ L +D +E G D+ EGE DEE E
Sbjct: 206 EEAEELGEDDDEEGSDADEGEEDEEEE 232
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 81 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 260
LY D DV A + + +Q ++ P G+++G PP V G + + R +C
Sbjct: 180 LYGQDQGDHDVQAPPLLVMGEEKLQ-IEARPQGYRIGRTSPPPLCVDAGHVVTMDR-ICR 237
Query: 261 L 263
L
Sbjct: 238 L 238
>03_05_0257 +
22439915-22440275,22440280-22440627,22440962-22441015,
22441390-22441763
Length = 378
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 47 PASWKIHGLLYAVQRRRCAEGRECGYR 127
P SWK ++ AV RRR E RE G R
Sbjct: 257 PISWKPKLVIAAVARRRQVETREGGLR 283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,880,294
Number of Sequences: 37544
Number of extensions: 377101
Number of successful extensions: 1281
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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