Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0436
(573 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 281 3e-76
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 281 3e-76
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 281 3e-76
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 281 4e-76
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 280 7e-76
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 280 7e-76
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 280 7e-76
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 2e-75
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 277 4e-75
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 276 8e-75
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 270 4e-73
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 248 2e-66
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 227 4e-60
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 208 2e-54
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 150 7e-37
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 133 8e-32
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 95 5e-20
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 95 5e-20
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 91 8e-19
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 83 2e-16
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-14
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 67 8e-12
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 55 4e-08
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 55 4e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 55 5e-08
SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_41375| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 29 2.0
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 29 2.7
SB_34594| Best HMM Match : ERCC4 (HMM E-Value=0.015) 29 2.7
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085) 28 4.7
SB_12833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 281 bits (689), Expect = 3e-76
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 229 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 288
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 289 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 348
Query: 363 GMEEG 377
GMEEG
Sbjct: 349 GMEEG 353
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS EGE +EE
Sbjct: 354 EFSEAREDLAALEKDYEEVGVDSVEGEGEEE 384
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 281 bits (689), Expect = 3e-76
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 217 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 276
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 277 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 336
Query: 363 GMEEG 377
GMEEG
Sbjct: 337 GMEEG 341
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS EGE +EE
Sbjct: 342 EFSEAREDLAALEKDYEEVGVDSVEGEGEEE 372
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 281 bits (689), Expect = 3e-76
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 90 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 149
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 150 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 209
Query: 363 GMEEG 377
GMEEG
Sbjct: 210 GMEEG 214
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS EGE +EE
Sbjct: 215 EFSEAREDLAALEKDYEEVGVDSVEGEGEEE 245
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 281 bits (688), Expect = 4e-76
Identities = 124/125 (99%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 280 bits (686), Expect = 7e-76
Identities = 124/125 (99%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 725 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 784
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 785 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 844
Query: 363 GMEEG 377
GMEEG
Sbjct: 845 GMEEG 849
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS EGE +EE
Sbjct: 850 EFSEAREDLAALEKDYEEVGVDSVEGEGEEE 880
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEE 433
EFSEAREDLAALEKDYEE
Sbjct: 417 EFSEAREDLAALEKDYEE 434
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 280 bits (686), Expect = 7e-76
Identities = 124/125 (99%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/34 (85%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDST-EGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS EGE +EE E
Sbjct: 417 EFSEAREDLAALEKDYEEVGVDSVEEGEEEEEGE 450
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 280 bits (686), Expect = 7e-76
Identities = 124/125 (99%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 257 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 316
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 317 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 376
Query: 363 GMEEG 377
GMEEG
Sbjct: 377 GMEEG 381
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS DE+
Sbjct: 382 EFSEAREDLAALEKDYEEVGVDSVGDGEDED 412
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 280 bits (686), Expect = 7e-76
Identities = 124/125 (99%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 877 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 936
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 937 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 996
Query: 363 GMEEG 377
GMEEG
Sbjct: 997 GMEEG 1001
Score = 182 bits (444), Expect = 1e-46
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 356 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 415
Query: 183 KVGINYQPPTVVPGGDLAKV 242
KVGINYQPPTVVPGGDLAK+
Sbjct: 416 KVGINYQPPTVVPGGDLAKI 435
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS E E +EE E
Sbjct: 1002 EFSEAREDLAALEKDYEEVGVDSVEEEGEEEGE 1034
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 278 bits (682), Expect = 2e-75
Identities = 123/125 (98%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+L+RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 708 TNACFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 767
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 768 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 827
Query: 363 GMEEG 377
GMEEG
Sbjct: 828 GMEEG 832
Score = 274 bits (673), Expect = 2e-74
Identities = 121/125 (96%), Positives = 124/125 (99%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T +CFEPANQMVKCDPRHGKYMACC+L+RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 277 TTSCFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 336
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 337 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 396
Query: 363 GMEEG 377
GMEEG
Sbjct: 397 GMEEG 401
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEV V+S E E +EE E+
Sbjct: 833 EFSEAREDLAALEKDYEEVAVESVE-EDEEEEEF 865
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEE 433
EFSEAREDLAALEKDYEE
Sbjct: 402 EFSEAREDLAALEKDYEE 419
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 277 bits (680), Expect = 4e-75
Identities = 122/125 (97%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN++IATIKTKRTIQFVDWCPTGF
Sbjct: 292 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS EGE +EE E
Sbjct: 417 EFSEAREDLAALEKDYEEVGVDSVEGEGEEEGE 449
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 276 bits (677), Expect = 8e-75
Identities = 121/125 (96%), Positives = 125/125 (100%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTK+TIQFVDWCPTGF
Sbjct: 663 TNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGF 722
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 723 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 782
Query: 363 GMEEG 377
GMEEG
Sbjct: 783 GMEEG 787
Score = 201 bits (490), Expect = 4e-52
Identities = 101/125 (80%), Positives = 101/125 (80%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQM DVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 1096 TNACFEPANQM------------------------DVNAAIATIKTKRTIQFVDWCPTGF 1131
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 1132 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 1191
Query: 363 GMEEG 377
GMEEG
Sbjct: 1192 GMEEG 1196
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS EGE +EE E
Sbjct: 1197 EFSEAREDLAALEKDYEEVGVDSVEGEGEEEGE 1229
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEE 433
EFSEAREDLAALEKDYEE
Sbjct: 788 EFSEAREDLAALEKDYEE 805
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 270 bits (663), Expect = 4e-73
Identities = 119/125 (95%), Positives = 123/125 (98%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 90 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 149
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQ PT VPGGDLAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGE
Sbjct: 150 KVGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGE 209
Query: 363 GMEEG 377
GMEEG
Sbjct: 210 GMEEG 214
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEE 433
EFSEAREDLAALEKDYEE
Sbjct: 215 EFSEAREDLAALEKDYEE 232
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 248 bits (607), Expect = 2e-66
Identities = 118/146 (80%), Positives = 123/146 (84%), Gaps = 21/146 (14%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T+ACFEP+NQMVKCDPR+GKYMACC+LYRGDVVPKDVN+AIA IK KRTIQFVDWCPTGF
Sbjct: 423 TSACFEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGF 482
Query: 183 K---------------------VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 299
K VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR
Sbjct: 483 KCHPNISDKQKKSTKTFYSGTQVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 542
Query: 300 LDHKFDLMYAKRAFVHWYVGEGMEEG 377
LDHKFDLMYAKRAFVHWYVGEGMEEG
Sbjct: 543 LDHKFDLMYAKRAFVHWYVGEGMEEG 568
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVG DS + + +E+E+
Sbjct: 569 EFSEAREDLAALEKDYEEVGADSPDDSVVDEDEF 602
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 227 bits (556), Expect = 4e-60
Identities = 105/125 (84%), Positives = 108/125 (86%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATI+ KRT QF DWCPTGF
Sbjct: 217 TNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGF 276
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGIN QPPTVVPGGDLAK IAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 277 KVGINSQPPTVVPGGDLAK------------PIAEAWARLDHKFDLMYAKRAFVHWYVGE 324
Query: 363 GMEEG 377
GMEEG
Sbjct: 325 GMEEG 329
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEAREDLAALEKDYEEVGVDS DE+
Sbjct: 330 EFSEAREDLAALEKDYEEVGVDSVGDGEDED 360
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 208 bits (509), Expect = 2e-54
Identities = 97/105 (92%), Positives = 99/105 (94%)
Frame = +3
Query: 63 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 242
++A C GDVV KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV
Sbjct: 297 WLAVCYS-EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 355
Query: 243 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 377
QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG
Sbjct: 356 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 400
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGEL 463
EFSEAREDLAALEKDYEEVGVDS GE+
Sbjct: 401 EFSEAREDLAALEKDYEEVGVDSV-GEV 427
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 150 bits (364), Expect = 7e-37
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF
Sbjct: 291 TNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 350
Query: 183 KVGINYQPP 209
KVGI ++ P
Sbjct: 351 KVGIRHKAP 359
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 133 bits (322), Expect = 8e-32
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 186 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 365
VGINYQ PT VPGGDLAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGEG
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEG 110
Query: 366 MEEG 377
MEEG
Sbjct: 111 MEEG 114
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS + + + E E
Sbjct: 115 EFSEAREDLAALEKDYEEVGVDSVDNDGETEAE 147
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDP HG+Y+ ++RG + K+++ + ++ K + FV+W P
Sbjct: 235 TQQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNV 294
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 295 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 346
Query: 363 GMEE 374
GM+E
Sbjct: 347 GMDE 350
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 83.0 bits (196), Expect = 2e-16
Identities = 45/123 (36%), Positives = 68/123 (55%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T A F+ N ++ C+P+ GKY+ +YRG + K+V +A + + + FVDW P
Sbjct: 195 TQAIFDNKNLLIACNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNG 254
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KV + PP D+ A C+ SN TAI E + R+ + LM+ +RAF+HWY E
Sbjct: 255 KVAVCDVPP-----HDMK--MSASCISSN-TAIQELFKRIRLHYKLMFRRRAFLHWYTEE 306
Query: 363 GME 371
GM+
Sbjct: 307 GMD 309
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 74.1 bits (174), Expect = 7e-14
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDV 98
TN CF+P NQMVKCDPRHGKYMACCMLYRGDV
Sbjct: 1203 TNMCFDPNNQMVKCDPRHGKYMACCMLYRGDV 1234
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 67.3 bits (157), Expect = 8e-12
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +3
Query: 15 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 194
F +Q++K DP+H Y+AC ++ RG+V D+ I +K +++F+ W G+K G+
Sbjct: 343 FSKDHQLIKADPKHNLYLACALILRGNVEVSDIRRNIERLKP--SLKFIHWNQEGWKTGL 400
Query: 195 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGME 371
PP P ++ L+N + I + L +F +Y ++A VH Y +G+E
Sbjct: 401 CSVPPVGQP--------YSLLTLANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLE 452
Query: 372 EG 377
G
Sbjct: 453 VG 454
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EFSEAREDLAALEKDYEEVGVDS EGE +E++E
Sbjct: 31 EFSEAREDLAALEKDYEEVGVDSVEGEGEEDDE 63
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 312 FDLMYAKRAFVHWYVGEGMEEG 377
+D YAKRAFVHWYVGEGMEEG
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEG 30
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +3
Query: 111 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 290
V+ + + K + FV+W P K + + P G ++ A + N TAI E
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQEL 142
Query: 291 WARLDHKFDLMYAKRAFVHWYVGEGMEE 374
+ R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 143 FKRVGEQFTAMFRRKAFLHWYTGEGMDE 170
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +3
Query: 111 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 290
V+ + + K + FV+W P K + + P G ++ A + N TAI E
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQEL 204
Query: 291 WARLDHKFDLMYAKRAFVHWYVGEGMEE 374
+ R+ +F M+ ++AF+HWY GEGM+E
Sbjct: 205 FKRVGEQFTAMFRRKAFLHWYTGEGMDE 232
Score = 38.3 bits (85), Expect = 0.004
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRG 92
T F+ N M CDPRHG+Y+ ++RG
Sbjct: 34 TQQMFDARNMMTACDPRHGRYLTVAAIFRG 63
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +3
Query: 156 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 335
FV+W P K + PP ++ A L N+TAI EA+ R +F M+ +R
Sbjct: 160 FVEWIPNNMKTAVCDVPPV--------GLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRR 211
Query: 336 AFVHWYVGEGME 371
AF+HWY EGM+
Sbjct: 212 AFLHWYTTEGMD 223
>SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 113 ECGYRNHQNQENHPVRGLVPNWFQGGHQLPTP 208
+C + NHQ+QENHPVR LVP+W QG + P P
Sbjct: 3 QCCHSNHQDQENHPVRPLVPHWIQGINYQPAP 34
>SB_41375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = -3
Query: 388 GELPPS---SIPSPTYQCTNARLAYIKSNLWSNLAHASAMAVV-LDNMHTARCTLARSPP 221
GEL P SI + ++ + ++ N W + +A V + + H C + PP
Sbjct: 273 GELLPGLVGSIANFVFKAAGEAVKFLGENAWLLILAVAAFLVRRMQSSHRNNCGILALPP 332
Query: 220 GTTVGGW*LMPTLKPVGH-QSTNWMVL 143
G L P + P GH ST+W+ L
Sbjct: 333 GRHAVDPVLHPRM-PTGHVMSTDWLCL 358
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 472 K*ILKRDEEQSKCPRPKGTKF 534
K ILK+DEE PRP G KF
Sbjct: 2153 KGILKKDEESEPSPRPPGVKF 2173
>SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 400 LAGFGELPPSSIPSPTYQCTNARLAYIKSNLWSNLAHAS 284
+ G+ LP + + SP + AR+ Y ++NL+++ HAS
Sbjct: 109 ITGWDALPAAGVTSP--EAHLARIKYYRNNLYAHATHAS 145
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 27 NQMVKCDPRHGK--YMACCMLYR-GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 197
N++V H K Y++C R GDV+ D N I + +F+D C + G
Sbjct: 230 NKIVASARHHVKPLYISCLTFARNGDVITGDTNGTIYVWREGNIARFIDICEV-YVEGPV 288
Query: 198 YQPPTVVPGGDL 233
Y V+P GDL
Sbjct: 289 Y-ALLVLPNGDL 299
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 374
+++V +LSN+ +++ K M+A RA+VH Y+ G+ E
Sbjct: 411 EKSVTLLSNSQTHVGPLSKVVGKAWTMFASRAYVHQYLRFGISE 454
>SB_34594| Best HMM Match : ERCC4 (HMM E-Value=0.015)
Length = 70
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 96 RLLCTAYNKPCIFHDAGHISP 34
RLLCT Y++PCI + + P
Sbjct: 43 RLLCTLYDRPCIIIEKDRVRP 63
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 94 TLCRRT*MRLSQPSKPREPSSSWTGAQLVSRWASIT 201
T CR MR SQ E SSWTGA+L AS+T
Sbjct: 604 TWCRVLCMRRSQRG---ETQSSWTGAKLTVTDASLT 636
>SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085)
Length = 292
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -3
Query: 376 PSSIPSPTYQCTNARLA--YIKSNLWSNLAHASAMAVVLDNMHTARCTLARSPP 221
PS +PSP Y LA Y+ N WS + S V +D H+ + A S P
Sbjct: 119 PSGVPSPLYMAKCVELAHYYLGFNGWST-SVISITPVPVDATHSPQSNPAPSHP 171
>SB_12833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 24 ANQMVKCDPRHGKYMACCMLYRG---DVVPKDVNAAIAT-IKTKRTIQFVDWCPTGFKVG 191
A Q DPRH CC + G D +P DV+ A ++ R I DW FKV
Sbjct: 415 AIQTALSDPRHYLKCECCEIEAGAIQDSLP-DVSVAYKLHLECSRMINLYDWL-QAFKVV 472
Query: 192 INYQP 206
++ P
Sbjct: 473 LDPDP 477
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,093
Number of Sequences: 59808
Number of extensions: 396211
Number of successful extensions: 1130
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -