Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0436
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 266 1e-71
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 266 1e-71
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 266 1e-71
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 266 1e-71
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 265 2e-71
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 265 2e-71
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 265 2e-71
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 265 2e-71
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 261 2e-70
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 259 1e-69
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 258 2e-69
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 258 2e-69
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 251 2e-67
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 251 2e-67
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 248 2e-66
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 237 5e-63
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 101 5e-22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 101 5e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 95 4e-20
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 94 6e-20
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 91 5e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 48 5e-06
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 48 5e-06
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 28 5.4
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 28 5.4
U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical p... 27 7.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 266 bits (651), Expect = 1e-71
Identities = 118/125 (94%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGF
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVGVDS E +E +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGVDSMEDNGEEGDEY 450
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 266 bits (651), Expect = 1e-71
Identities = 118/125 (94%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGF
Sbjct: 291 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 350
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 351 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 410
Query: 363 GMEEG 377
GMEEG
Sbjct: 411 GMEEG 415
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVGVDS E +E +EY
Sbjct: 416 EFSEAREDLAALEKDYEEVGVDSMEDNGEEGDEY 449
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 266 bits (651), Expect = 1e-71
Identities = 118/125 (94%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGF
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVGVDS E +E +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGVDSMEDNGEEGDEY 450
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 266 bits (651), Expect = 1e-71
Identities = 118/125 (94%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN CFEP NQMVKCDPRHGKYMA C+L+RGDVVPKDVNAAIATIKTKR+IQFVDWCPTGF
Sbjct: 292 TNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVGVDS E +E +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGVDSMEDNGEEGDEY 450
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 265 bits (649), Expect = 2e-71
Identities = 117/125 (93%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EF+EAREDLAALEKDYEEVG DS EG +E EY
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGGEEEGEEY 448
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 265 bits (649), Expect = 2e-71
Identities = 117/125 (93%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EF+EAREDLAALEKDYEEVG DS EG +EE E
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGGNEEEGE 447
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 265 bits (649), Expect = 2e-71
Identities = 117/125 (93%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EF+EAREDLAALEKDYEEVG DS EG +EE E
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGGNEEEGE 447
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 265 bits (649), Expect = 2e-71
Identities = 117/125 (93%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPRHGKYMA C+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EF+EAREDLAALEKDYEEVG DS EG +E EY
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGGEEEGEEY 448
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 261 bits (640), Expect = 2e-70
Identities = 112/125 (89%), Positives = 121/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN CFEP +QMVKCDPR+GKYMACC+LYRGDVVPK++N+AI+TIKTKR IQFVDWCPTGF
Sbjct: 292 TNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGF 351
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGD+AK+QRAVCMLSNTTAI EAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGE 411
Query: 363 GMEEG 377
GMEEG
Sbjct: 412 GMEEG 416
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEE 472
EFSEARED+AALEKDYEEVGVDS + DEE
Sbjct: 417 EFSEAREDMAALEKDYEEVGVDSFDPN-DEE 446
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 259 bits (634), Expect = 1e-69
Identities = 113/125 (90%), Positives = 119/125 (95%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T CFEP QMVKCDPR GKYMACC+LYRGDVVPKDVNAAIA++KTKR+IQFVDWCPTGF
Sbjct: 297 TQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGF 356
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPG DL+K+QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 357 KVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 416
Query: 363 GMEEG 377
GMEEG
Sbjct: 417 GMEEG 421
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVG+D+ GE DEE++Y
Sbjct: 422 EFSEAREDLAALEKDYEEVGLDA--GEPDEEDDY 453
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 258 bits (633), Expect = 2e-69
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPR+GKYMA C+LYRGDVVPKDVN AI IKTKR++QFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EF+EAREDLAALEKDYEEVG DS EG ++ EY
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGLEEDGEEY 448
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 258 bits (633), Expect = 2e-69
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
TN+CFEPANQMVKCDPR+GKYMA C+LYRGDVVPKDVN AI IKTKR++QFVDWCPTGF
Sbjct: 290 TNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGF 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 350 KVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGE 409
Query: 363 GMEEG 377
GMEEG
Sbjct: 410 GMEEG 414
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EF+EAREDLAALEKDYEEVG DS EG ++ EY
Sbjct: 415 EFTEAREDLAALEKDYEEVGADSNEGLEEDGEEY 448
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 251 bits (615), Expect = 2e-67
Identities = 108/125 (86%), Positives = 117/125 (93%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T+ACFEP QMVKCDPR GKYMA C+LYRGDVVPKD+N+AIA +KTKRT+QFV+WCPTGF
Sbjct: 298 THACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGF 357
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 358 KVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 417
Query: 363 GMEEG 377
GMEEG
Sbjct: 418 GMEEG 422
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEEN 475
EFSEARED+AALEKDYEE+G D ++D+++
Sbjct: 423 EFSEAREDMAALEKDYEEIGEDELPDDIDDQS 454
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 251 bits (615), Expect = 2e-67
Identities = 108/125 (86%), Positives = 117/125 (93%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T+ACFEP QMVKCDPR GKYMA C+LYRGDVVPKD+N+AIA +KTKRT+QFV+WCPTGF
Sbjct: 270 THACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGF 329
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 330 KVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 389
Query: 363 GMEEG 377
GMEEG
Sbjct: 390 GMEEG 394
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEEN 475
EFSEARED+AALEKDYEE+G D ++D+++
Sbjct: 395 EFSEAREDMAALEKDYEEIGEDELPDDIDDQS 426
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 248 bits (608), Expect = 2e-66
Identities = 106/125 (84%), Positives = 119/125 (95%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T +CFE +NQMVKCDP+HGKYMA C+LYRGDVVPKDV+AAI +IKT+R++QFVDWCPTGF
Sbjct: 287 TKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGF 346
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVG+NYQPPTV+PGGD+AKV RAVCMLSNTTAIAEAW RLD+KFDLMYAKRAFVHWYVGE
Sbjct: 347 KVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGE 406
Query: 363 GMEEG 377
GMEEG
Sbjct: 407 GMEEG 411
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EFSEAREDLAALEKDYEEVG DS + + ++EY
Sbjct: 412 EFSEAREDLAALEKDYEEVGADSDAND-NGDDEY 444
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 237 bits (579), Expect = 5e-63
Identities = 105/125 (84%), Positives = 112/125 (89%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T+ CFE ANQMVKCDP GKYMA C+LYRGDVVPKDVNAAI+++K KR I FVDWCPTGF
Sbjct: 295 THMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGF 354
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
KVGINYQ P V GGDLAKV RAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHW+VGE
Sbjct: 355 KVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGE 414
Query: 363 GMEEG 377
GMEEG
Sbjct: 415 GMEEG 419
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENE 478
EF EAR+DLAALEKDY EV D+ +L+EEN+
Sbjct: 420 EFMEARDDLAALEKDYAEVSRDT--ADLEEEND 450
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 101 bits (241), Expect = 5e-22
Identities = 44/124 (35%), Positives = 69/124 (55%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T CF+ N M CDPRHG+Y+ ++RG + K+V+ + I+ K + FVDW P
Sbjct: 290 TQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 101 bits (241), Expect = 5e-22
Identities = 44/124 (35%), Positives = 69/124 (55%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T CF+ N M CDPRHG+Y+ ++RG + K+V+ + I+ K + FVDW P
Sbjct: 290 TQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/124 (34%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP V+ A + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/124 (33%), Positives = 69/124 (55%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + ++V+ + +++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ A + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 94.3 bits (224), Expect = 6e-20
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + ++V+ + ++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ A + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/124 (32%), Positives = 68/124 (54%)
Frame = +3
Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
T F+ N M CDPRHG+Y+ ++RG + ++V+ + ++ K + FV+W P
Sbjct: 290 TQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNV 349
Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
K + PP ++ + + N+TAI E + R+ +F M+ ++AF+HWY GE
Sbjct: 350 KTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 401
Query: 363 GMEE 374
GM+E
Sbjct: 402 GMDE 405
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = +3
Query: 252 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEG 377
VCMLS+TTAIAEAW+RLD+KFDLMYAKRAFVHWYVGEGMEEG
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEG 51
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
EF+EAREDLAALEKDYEEVG DS EG ++ EY
Sbjct: 52 EFTEAREDLAALEKDYEEVGADSNEGLEEDGEEY 85
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/116 (22%), Positives = 55/116 (47%)
Frame = +3
Query: 24 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 203
A ++ C+ GK+++ ++YRG K I +++ + + ++ P +
Sbjct: 295 AKNIMTCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDV--- 351
Query: 204 PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 371
+P L + + ++N+TAI E R+ +F ++ ++AF+HWY E E
Sbjct: 352 --CDIPSRGL---KTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYTMEESE 402
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/116 (22%), Positives = 55/116 (47%)
Frame = +3
Query: 24 ANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 203
A ++ C+ GK+++ ++YRG K I +++ + + ++ P +
Sbjct: 295 AKNIMTCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDV--- 351
Query: 204 PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 371
+P L + + ++N+TAI E R+ +F ++ ++AF+HWY E E
Sbjct: 352 --CDIPSRGL---KTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYTMEESE 402
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 159 VDWCPTGFKVGINY 200
+DWCP +VG+NY
Sbjct: 341 IDWCPQAAEVGVNY 354
>Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical
protein R10D12.1 protein.
Length = 485
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 175 VGHQSTNWMVLLVLMVAIAAFTSFGTTSPLYSIQQA 68
VG +++W L + IAA T+FG TS ++S+ A
Sbjct: 162 VGAITSSWASLAQQGLFIAALTTFGQTSSIFSMPVA 197
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 258 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 344
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 258 MLSNTTAIAEAWARLDHKFDLMYAKRAFV 344
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical
protein C25H3.4 protein.
Length = 516
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 419 KDYEEVGVDSTEGELDEENEY*SGMKNSRSVLGRKE 526
+D+ ++GV+S E E DEE + + +S L ++E
Sbjct: 193 EDWNKIGVESEESEEDEETDERKELDACQSTLPKEE 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,318,330
Number of Sequences: 27780
Number of extensions: 277621
Number of successful extensions: 968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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