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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0436
         (573 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne...   254   3e-68
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne...   254   3e-68
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide...   253   7e-68
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id...   253   7e-68
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne...   253   7e-68
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide...   245   2e-65
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide...   192   2e-49
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden...    91   4e-19
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden...    90   1e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near...    89   2e-18
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near...    89   2e-18
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide...    89   2e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t...    89   2e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden...    87   8e-18
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden...    87   1e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden...    87   1e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin...    47   8e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin...    44   5e-05
At3g25290.1 68416.m03158 auxin-responsive family protein similar...    33   0.18 
At1g68080.1 68414.m07777 expressed protein                             29   2.9  
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ...    28   3.8  
At1g60940.2 68414.m06860 serine/threonine protein kinase, putati...    28   5.1  
At1g60940.1 68414.m06859 serine/threonine protein kinase, putati...    28   5.1  
At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) ident...    27   6.7  
At5g49950.1 68418.m06185 embryogenesis-associated protein-relate...    27   6.7  
At3g09560.2 68416.m01136 lipin family protein contains Pfam prof...    27   6.7  
At3g09560.1 68416.m01135 lipin family protein contains Pfam prof...    27   6.7  

>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  254 bits (622), Expect = 3e-68
 Identities = 108/125 (86%), Positives = 118/125 (94%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGF
Sbjct: 292 TNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  + E DE  +Y
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEEDEGEDY 450


>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
           nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
           chain {Arabidopsis thaliana}
          Length = 450

 Score =  254 bits (622), Expect = 3e-68
 Identities = 108/125 (86%), Positives = 118/125 (94%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGF
Sbjct: 292 TNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  + E DE  +Y
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEEDEGEDY 450


>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  253 bits (619), Expect = 7e-68
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  + E DE  EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450


>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
           identical to tubulin alpha-2/alpha-4 chain SP|P29510
           GB:P29510 from [Arabidopsis thaliana]
          Length = 450

 Score =  253 bits (619), Expect = 7e-68
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  + E DE  EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450


>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
           nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
           chain from [Arabidopsis thaliana]
          Length = 450

 Score =  253 bits (619), Expect = 7e-68
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  + E DE  EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450


>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
           identical to SP|P11139 Tubulin alpha-1 chain
           {Arabidopsis thaliana}
          Length = 450

 Score =  245 bits (599), Expect = 2e-65
 Identities = 103/125 (82%), Positives = 115/125 (92%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGF
Sbjct: 292 TTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGE
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGE 411

Query: 363 GMEEG 377
           GMEEG
Sbjct: 412 GMEEG 416



 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481
           EFSEAREDLAALEKDYEEVG +  E + +E +EY
Sbjct: 417 EFSEAREDLAALEKDYEEVGGEGAEDDDEEGDEY 450


>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
           identical to SP|P29511 Tubulin alpha-6 chain
           {Arabidopsis thaliana}
          Length = 427

 Score =  192 bits (467), Expect = 2e-49
 Identities = 81/95 (85%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF
Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 287
           K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386


>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
           identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
           thaliana}
          Length = 447

 Score = 91.5 bits (217), Expect = 4e-19
 Identities = 41/124 (33%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  I  ++ K +  FV+W P   
Sbjct: 291 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNV 350

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PPT         ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 351 KSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 402

Query: 363 GMEE 374
           GM+E
Sbjct: 403 GMDE 406


>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
           identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 89.8 bits (213), Expect = 1e-18
 Identities = 41/124 (33%), Positives = 67/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  I  I+ K +  FV+W P   
Sbjct: 291 TQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNV 350

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PP          ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 351 KSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 402

Query: 363 GMEE 374
           GM+E
Sbjct: 403 GMDE 406


>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PPT         ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
           identical to SP|P29512 Tubulin beta-2/beta-3 chain
           {Arabidopsis thaliana}
          Length = 450

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PPT         ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
           identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
           thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
          Length = 449

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PPT         ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
           GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +   PPT         ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
           identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
           thaliana}
          Length = 444

 Score = 87.0 bits (206), Expect = 8e-18
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  I+ K +  FV+W P   
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +      + P G    ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
           identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
           thaliana}
          Length = 449

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 39/124 (31%), Positives = 67/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +      + P G    +  A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
           identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
           thaliana}
          Length = 444

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 39/124 (31%), Positives = 68/124 (54%)
 Frame = +3

Query: 3   TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182
           T   ++  N M   DPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNV 349

Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362
           K  +      + P G    ++ A   + N+T+I E + R+  +F  M+ ++AF+HWY GE
Sbjct: 350 KSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401

Query: 363 GMEE 374
           GM+E
Sbjct: 402 GMDE 405


>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
           (TUBG2) identical to  SP|P38558 Tubulin gamma-2 chain
           (Gamma-2 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 24/98 (24%), Positives = 54/98 (55%)
 Frame = +3

Query: 60  KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 239
           KY++   + +G+V P  V+ ++  I+ ++ + F+DW P   +V ++ + P V     ++ 
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSG 377

Query: 240 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 353
           +     ML++ T+I   ++R   ++D +  K+AF+  Y
Sbjct: 378 L-----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNY 410


>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
           (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
           (Gamma-1 tubulin) {Arabidopsis thaliana}
          Length = 474

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 22/98 (22%), Positives = 54/98 (55%)
 Frame = +3

Query: 60  KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 239
           KY++   + +G+V P  V+ ++  I+ ++ + F++W P   +V ++ + P V     ++ 
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377

Query: 240 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 353
           +     ML++ T+I   +++   ++D +  K+AF+  Y
Sbjct: 378 L-----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNY 410


>At3g25290.1 68416.m03158 auxin-responsive family protein similar to
           auxin-induced protein AIR12 GI:11357190 [Arabidopsis
           thaliana]
          Length = 393

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 320 QVELVVQSGPRLGDGGCVGQHAHGALHLGEVSA 222
           +V  V Q GP LG GG +G+HA  + +L  +S+
Sbjct: 160 KVNQVWQVGPELGPGGMIGRHAFDSANLASMSS 192


>At1g68080.1 68414.m07777 expressed protein
          Length = 383

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -2

Query: 203 LVIDAHLETSWAPVHELDGS---LGFDGCDSRIHVLRHNVSSVQ 81
           L + A     W   H+ DGS   +GFD C +R+H+L  +V S+Q
Sbjct: 195 LPLPASTNMYWFCPHQ-DGSNQNIGFDVCVARLHLLGFDVHSLQ 237


>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 587

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 87  RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 230
           +G  V  D  A   T  TK+ +   DW P+  FK      PP ++P  D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355


>At1g60940.2 68414.m06860 serine/threonine protein kinase, putative
           similar to serine/threonine-protein kinase ASK1 from
           [Arabidopsis thaliana], SWISS-PROT:P43291
          Length = 361

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 398 EDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLG 517
           ED    E+D EE  V+  E E DEE+EY   +K   + +G
Sbjct: 318 EDAEGKEEDAEEE-VEEVEEEEDEEDEYDKTVKQVHASMG 356


>At1g60940.1 68414.m06859 serine/threonine protein kinase, putative
           similar to serine/threonine-protein kinase ASK1 from
           [Arabidopsis thaliana], SWISS-PROT:P43291
          Length = 361

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 398 EDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLG 517
           ED    E+D EE  V+  E E DEE+EY   +K   + +G
Sbjct: 318 EDAEGKEEDAEEE-VEEVEEEEDEEDEYDKTVKQVHASMG 356


>At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1)
           identical to pseudo-response regulator 1 GI:7576354 from
           [Arabidopsis thaliana]; timing of CAB expression 1
           protein (TOC1) GI:9247019; contains Pfam profile
           PF00072:  Response regulator receiver domain; identical
           to cDNA ABI3-interacting protein 1 (aip1 gene)
           GI:6996312
          Length = 618

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
 Frame = -2

Query: 191 AHLETSW----APVHELDGSLGFDG 129
           +H E  W    APVH  DG LG DG
Sbjct: 194 SHQENEWSVATAPVHARDGGLGADG 218


>At5g49950.1 68418.m06185 embryogenesis-associated protein-related
           contains weak similarity to Embryogenesis-associated
           protein EMB8 (Swiss-Prot:Q40863) [Picea glauca]
          Length = 537

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
 Frame = -3

Query: 532 IWFLSAEDTSTVLHPALIFIFFVQLPFSGVHA-YFLVVLL*SCQV----LAGFGELPPSS 368
           I F  A+  S   +P   F  F+      +H  YF    L S  +    L  FG+ PP S
Sbjct: 47  IHFPKADPISLTFNPNSDFCKFIVSKCRLLHGRYFPTFWLSSPHLQTAFLTLFGKSPPFS 106

Query: 367 IPSPTYQCTNARLAYIKSNLWSNLAHASAMAVVLDNMHTARCTLARSPPGTT 212
                YQ T+     +   + S++    +  V   N  T R  +A   PG T
Sbjct: 107 YKRILYQATDGGTIALDWLMHSDVVEGISQVVNASNPGTDRTPIAIIVPGLT 158


>At3g09560.2 68416.m01136 lipin family protein contains Pfam
           profile: PF04571 lipin, N-terminal conserved region
          Length = 904

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 416 EKDYEEVGVDSTEGELDEENE 478
           ++D E V +DST  E+D++NE
Sbjct: 446 DQDSERVSIDSTREEVDKDNE 466


>At3g09560.1 68416.m01135 lipin family protein contains Pfam
           profile: PF04571 lipin, N-terminal conserved region
          Length = 904

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 416 EKDYEEVGVDSTEGELDEENE 478
           ++D E V +DST  E+D++NE
Sbjct: 446 DQDSERVSIDSTREEVDKDNE 466


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,309
Number of Sequences: 28952
Number of extensions: 270277
Number of successful extensions: 874
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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