BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0436 (573 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 254 3e-68 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 254 3e-68 At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 253 7e-68 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 253 7e-68 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 253 7e-68 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 245 2e-65 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 192 2e-49 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 91 4e-19 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 90 1e-18 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 89 2e-18 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 89 2e-18 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 89 2e-18 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 89 2e-18 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 87 8e-18 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 87 1e-17 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 87 1e-17 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 47 8e-06 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 44 5e-05 At3g25290.1 68416.m03158 auxin-responsive family protein similar... 33 0.18 At1g68080.1 68414.m07777 expressed protein 29 2.9 At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 3.8 At1g60940.2 68414.m06860 serine/threonine protein kinase, putati... 28 5.1 At1g60940.1 68414.m06859 serine/threonine protein kinase, putati... 28 5.1 At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) ident... 27 6.7 At5g49950.1 68418.m06185 embryogenesis-associated protein-relate... 27 6.7 At3g09560.2 68416.m01136 lipin family protein contains Pfam prof... 27 6.7 At3g09560.1 68416.m01135 lipin family protein contains Pfam prof... 27 6.7 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 254 bits (622), Expect = 3e-68 Identities = 108/125 (86%), Positives = 118/125 (94%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGF Sbjct: 292 TNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 52.4 bits (120), Expect = 2e-07 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + + E DE +Y Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEEDEGEDY 450 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 254 bits (622), Expect = 3e-68 Identities = 108/125 (86%), Positives = 118/125 (94%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGF Sbjct: 292 TNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 52.4 bits (120), Expect = 2e-07 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + + E DE +Y Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEEDEGEDY 450 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 253 bits (619), Expect = 7e-68 Identities = 107/125 (85%), Positives = 119/125 (95%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 53.2 bits (122), Expect = 1e-07 Identities = 25/34 (73%), Positives = 27/34 (79%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + + E DE EY Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 253 bits (619), Expect = 7e-68 Identities = 107/125 (85%), Positives = 119/125 (95%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 53.2 bits (122), Expect = 1e-07 Identities = 25/34 (73%), Positives = 27/34 (79%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + + E DE EY Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 253 bits (619), Expect = 7e-68 Identities = 107/125 (85%), Positives = 119/125 (95%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 53.2 bits (122), Expect = 1e-07 Identities = 25/34 (73%), Positives = 27/34 (79%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + + E DE EY Sbjct: 417 EFSEAREDLAALEKDYEEVGAEGGDDEDDEGEEY 450 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 245 bits (599), Expect = 2e-65 Identities = 103/125 (82%), Positives = 115/125 (92%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGF Sbjct: 292 TTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGE Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGE 411 Query: 363 GMEEG 377 GMEEG Sbjct: 412 GMEEG 416 Score = 51.6 bits (118), Expect = 4e-07 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 380 EFSEAREDLAALEKDYEEVGVDSTEGELDEENEY 481 EFSEAREDLAALEKDYEEVG + E + +E +EY Sbjct: 417 EFSEAREDLAALEKDYEEVGGEGAEDDDEEGDEY 450 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 192 bits (467), Expect = 2e-49 Identities = 81/95 (85%), Positives = 90/95 (94%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGF Sbjct: 292 TNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGF 351 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 287 K GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 91.5 bits (217), Expect = 4e-19 Identities = 41/124 (33%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P Sbjct: 291 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNV 350 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 351 KSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 402 Query: 363 GMEE 374 GM+E Sbjct: 403 GMDE 406 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 89.8 bits (213), Expect = 1e-18 Identities = 41/124 (33%), Positives = 67/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P Sbjct: 291 TQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNV 350 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 351 KSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 402 Query: 363 GMEE 374 GM+E Sbjct: 403 GMDE 406 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 89.0 bits (211), Expect = 2e-18 Identities = 40/124 (32%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 89.0 bits (211), Expect = 2e-18 Identities = 40/124 (32%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 89.0 bits (211), Expect = 2e-18 Identities = 40/124 (32%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 89.0 bits (211), Expect = 2e-18 Identities = 40/124 (32%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 87.0 bits (206), Expect = 8e-18 Identities = 40/124 (32%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 86.6 bits (205), Expect = 1e-17 Identities = 39/124 (31%), Positives = 67/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + + P G + A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 86.6 bits (205), Expect = 1e-17 Identities = 39/124 (31%), Positives = 68/124 (54%) Frame = +3 Query: 3 TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 182 T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNV 349 Query: 183 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 362 K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GE Sbjct: 350 KSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGE 401 Query: 363 GMEE 374 GM+E Sbjct: 402 GMDE 405 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 47.2 bits (107), Expect = 8e-06 Identities = 24/98 (24%), Positives = 54/98 (55%) Frame = +3 Query: 60 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 239 KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSG 377 Query: 240 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 353 + ML++ T+I ++R ++D + K+AF+ Y Sbjct: 378 L-----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNY 410 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 44.4 bits (100), Expect = 5e-05 Identities = 22/98 (22%), Positives = 54/98 (55%) Frame = +3 Query: 60 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 239 KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377 Query: 240 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 353 + ML++ T+I +++ ++D + K+AF+ Y Sbjct: 378 L-----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNY 410 >At3g25290.1 68416.m03158 auxin-responsive family protein similar to auxin-induced protein AIR12 GI:11357190 [Arabidopsis thaliana] Length = 393 Score = 32.7 bits (71), Expect = 0.18 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -2 Query: 320 QVELVVQSGPRLGDGGCVGQHAHGALHLGEVSA 222 +V V Q GP LG GG +G+HA + +L +S+ Sbjct: 160 KVNQVWQVGPELGPGGMIGRHAFDSANLASMSS 192 >At1g68080.1 68414.m07777 expressed protein Length = 383 Score = 28.7 bits (61), Expect = 2.9 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = -2 Query: 203 LVIDAHLETSWAPVHELDGS---LGFDGCDSRIHVLRHNVSSVQ 81 L + A W H+ DGS +GFD C +R+H+L +V S+Q Sbjct: 195 LPLPASTNMYWFCPHQ-DGSNQNIGFDVCVARLHLLGFDVHSLQ 237 >At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 587 Score = 28.3 bits (60), Expect = 3.8 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +3 Query: 87 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 230 +G V D A T TK+ + DW P+ FK PP ++P D Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355 >At1g60940.2 68414.m06860 serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK1 from [Arabidopsis thaliana], SWISS-PROT:P43291 Length = 361 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 398 EDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLG 517 ED E+D EE V+ E E DEE+EY +K + +G Sbjct: 318 EDAEGKEEDAEEE-VEEVEEEEDEEDEYDKTVKQVHASMG 356 >At1g60940.1 68414.m06859 serine/threonine protein kinase, putative similar to serine/threonine-protein kinase ASK1 from [Arabidopsis thaliana], SWISS-PROT:P43291 Length = 361 Score = 27.9 bits (59), Expect = 5.1 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 398 EDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLG 517 ED E+D EE V+ E E DEE+EY +K + +G Sbjct: 318 EDAEGKEEDAEEE-VEEVEEEEDEEDEYDKTVKQVHASMG 356 >At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) identical to pseudo-response regulator 1 GI:7576354 from [Arabidopsis thaliana]; timing of CAB expression 1 protein (TOC1) GI:9247019; contains Pfam profile PF00072: Response regulator receiver domain; identical to cDNA ABI3-interacting protein 1 (aip1 gene) GI:6996312 Length = 618 Score = 27.5 bits (58), Expect = 6.7 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%) Frame = -2 Query: 191 AHLETSW----APVHELDGSLGFDG 129 +H E W APVH DG LG DG Sbjct: 194 SHQENEWSVATAPVHARDGGLGADG 218 >At5g49950.1 68418.m06185 embryogenesis-associated protein-related contains weak similarity to Embryogenesis-associated protein EMB8 (Swiss-Prot:Q40863) [Picea glauca] Length = 537 Score = 27.5 bits (58), Expect = 6.7 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 5/112 (4%) Frame = -3 Query: 532 IWFLSAEDTSTVLHPALIFIFFVQLPFSGVHA-YFLVVLL*SCQV----LAGFGELPPSS 368 I F A+ S +P F F+ +H YF L S + L FG+ PP S Sbjct: 47 IHFPKADPISLTFNPNSDFCKFIVSKCRLLHGRYFPTFWLSSPHLQTAFLTLFGKSPPFS 106 Query: 367 IPSPTYQCTNARLAYIKSNLWSNLAHASAMAVVLDNMHTARCTLARSPPGTT 212 YQ T+ + + S++ + V N T R +A PG T Sbjct: 107 YKRILYQATDGGTIALDWLMHSDVVEGISQVVNASNPGTDRTPIAIIVPGLT 158 >At3g09560.2 68416.m01136 lipin family protein contains Pfam profile: PF04571 lipin, N-terminal conserved region Length = 904 Score = 27.5 bits (58), Expect = 6.7 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +2 Query: 416 EKDYEEVGVDSTEGELDEENE 478 ++D E V +DST E+D++NE Sbjct: 446 DQDSERVSIDSTREEVDKDNE 466 >At3g09560.1 68416.m01135 lipin family protein contains Pfam profile: PF04571 lipin, N-terminal conserved region Length = 904 Score = 27.5 bits (58), Expect = 6.7 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +2 Query: 416 EKDYEEVGVDSTEGELDEENE 478 ++D E V +DST E+D++NE Sbjct: 446 DQDSERVSIDSTREEVDKDNE 466 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,797,309 Number of Sequences: 28952 Number of extensions: 270277 Number of successful extensions: 874 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 865 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1112061928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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