Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0433
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 72 4e-13
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 51 7e-07
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 48 9e-06
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 45 6e-05
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 32 0.36
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.3
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 467 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 467 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 467 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 80 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 119
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 467 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
TAGR + ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRVAMEVESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 54.4 bits (125), Expect = 8e-08
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = -1
Query: 575 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 396
IG TL+RHPFSGLVASA + TP F G LN FGS
Sbjct: 24 IGATLERHPFSGLVASAEQP--TP------------------FVGSDERRLWHLNRAFGS 63
Query: 395 SHSASSAYQNWPTWHRHQISGF 330
S ASSAYQ WPT + H +SGF
Sbjct: 64 SRIASSAYQKWPTRNSHSLSGF 85
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 54.4 bits (125), Expect = 8e-08
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = -1
Query: 575 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 396
IG TL+RHPFSGLVASA + TP F G LN FGS
Sbjct: 22 IGATLERHPFSGLVASAEQP--TP------------------FVGSDERRLWHLNRAFGS 61
Query: 395 SHSASSAYQNWPTWHRHQISGF 330
S ASSAYQ WPT + H +SGF
Sbjct: 62 SRIASSAYQKWPTSNSHSLSGF 83
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 488 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 9 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 41
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 488 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 488 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 494 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 586
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 10 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGFIVRVSRSSHPFKV 291
LN FGSS ASSAYQ WPT + H +SGF SR+S+ FKV
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 497 SAKECATTHLPKQPALKMDGAEAFCLYTTV 586
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 497 SAKECATTHLPKQPALKMDGAEAFCLYTTV 586
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 497 SAKECATTHLPKQPALKMDGAEAFCLYTTV 586
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 497 SAKECATTHLPKQPALKMDGAEAFCLYTTV 586
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +3
Query: 411 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRL 521
++ +RS D KGVG S QQDGGHGS NPLR QRL
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQRL 45
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 500 AKECATTHLPKQPALKMDGAEAFCLYTTV 586
AKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 39 AKECVTTHLPKQLALKMDGAQASHLYRAV 67
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 411 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 506
++ +RS D KGVG S QQDGGHGS NP +
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAK 40
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = -1
Query: 104 NRYGPPSGFPLTST*PGIVHHLSGPSICDSERAF 3
NRY PP FPL S GIVHHLSGP+ C + F
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCALTQTF 34
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 54 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 96 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 139 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNHAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN +GSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -3
Query: 105 ESLRSSIRVSPDFDLTRHSSPSFGSQHL 22
ESLR+S RVS F L RHSSPSFGSQ +
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQM 62
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 411 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 506
++ +RS D KGVG S QQDGGHGS NPL+
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLK 40
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +2
Query: 503 KECATTHLPKQPALKMDGAEAFCLYTTV 586
KEC TT LPKQ ALKMDGA+A LY V
Sbjct: 40 KECVTTPLPKQLALKMDGAQASHLYRAV 67
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSA Q WPT + H +SGF
Sbjct: 74 LNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 427 NAHGTP*KALVAHDSRTVAMEVGIR 501
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 488 KSESAKECATTHLPKQPALKM 550
K ESAKEC TTHLPKQ ALKM
Sbjct: 2 KVESAKECVTTHLPKQLALKM 22
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQISGF 330
LN FGSS ASSAYQ PT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKGPTRNSHSLSGF 45
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPTWHRHQI 339
LN FGSS ASSAYQ WPT + H +
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSL 42
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWPT 357
LN FGSS ASSAYQ WPT
Sbjct: 17 LNRAFGSSRIASSAYQKWPT 36
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 104 NRYGPPSGFPLTST*PGIVHH 42
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 154 ISLSPLYPVPTIDLHVR 104
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 32.3 bits (70), Expect = 0.36
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = -2
Query: 463 ERPTPFMVSHERFLGALTLRLVHPTAPVLLTKI-------GPLGTVIRSPASSFE*AGVL 305
E+PTPF+ S ER RL HP ++I GP T I P + + G+L
Sbjct: 58 EQPTPFVGSDER-------RLWHPYRAFGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLL 109
Query: 304 THLKFENR 281
T+LKFENR
Sbjct: 110 TNLKFENR 117
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 404 FGSSHSASSAYQNWPTWHRHQISGF 330
FGSS ASS YQN PT R GF
Sbjct: 78 FGSSRIASSGYQNGPTRTRIHCPGF 102
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -1
Query: 416 LNTTFGSSHSASSAYQNWP 360
LN FGSS ASSAYQN P
Sbjct: 17 LNRAFGSSRIASSAYQNGP 35
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 460 RPTPFMVSHERFLGALTLRLVHPTAPVLLTKIGPLGTVIRSPAS 329
+PTPF+ S ER L L + GPLGT I PAS
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 519 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 424
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,152,300
Number of Sequences: 59808
Number of extensions: 490617
Number of successful extensions: 1225
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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