BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0429 (530 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 37 0.010 At5g24580.1 68418.m02902 copper-binding family protein similar t... 35 0.039 At5g24580.2 68418.m02903 copper-binding family protein similar t... 33 0.12 At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 33 0.16 At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 32 0.21 At5g17980.1 68418.m02109 C2 domain-containing protein contains I... 32 0.28 At5g41950.1 68418.m05108 expressed protein 31 0.37 At5g17710.2 68418.m02076 co-chaperone grpE family protein simila... 31 0.48 At4g31920.1 68417.m04535 two-component responsive regulator fami... 31 0.48 At2g47620.1 68415.m05941 SWIRM domain-containing protein / DNA-b... 31 0.48 At5g64910.1 68418.m08165 expressed protein ; expression support... 31 0.64 At3g14670.1 68416.m01856 hypothetical protein 31 0.64 At5g63550.1 68418.m07976 expressed protein 30 0.85 At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 30 0.85 At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 30 0.85 At4g26630.1 68417.m03837 expressed protein 30 0.85 At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 30 1.1 At1g22882.1 68414.m02857 expressed protein 30 1.1 At1g20610.1 68414.m02575 cyclin, putative similar to G2/mitotic-... 30 1.1 At3g04450.1 68416.m00472 myb family transcription factor contain... 29 1.5 At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 1.5 At2g22080.1 68415.m02622 expressed protein 29 1.5 At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 29 2.0 At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 29 2.0 At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 29 2.0 At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 29 2.0 At3g18690.1 68416.m02374 VQ motif-containing protein contains PF... 29 2.0 At3g05900.1 68416.m00664 neurofilament protein-related similar t... 29 2.0 At1g21700.1 68414.m02717 SWIRM domain-containing protein / DNA-b... 29 2.0 At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 2.6 At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 2.6 At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 29 2.6 At5g16030.1 68418.m01874 expressed protein 29 2.6 At5g59570.1 68418.m07465 myb family transcription factor contain... 28 3.4 At5g53880.1 68418.m06702 expressed protein 28 3.4 At3g07195.1 68416.m00858 proline-rich family protein 28 3.4 At1g30810.1 68414.m03767 transcription factor jumonji (jmj) fami... 28 3.4 At5g17910.1 68418.m02100 expressed protein 28 4.5 At5g11980.1 68418.m01401 conserved oligomeric Golgi complex comp... 28 4.5 At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 28 4.5 At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta... 28 4.5 At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 6.0 At2g40660.1 68415.m05017 tRNA-binding region domain-containing p... 27 6.0 At2g35880.1 68415.m04405 expressed protein 27 6.0 At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 27 6.0 At1g56660.1 68414.m06516 expressed protein 27 6.0 At5g48610.1 68418.m06012 expressed protein ; expression supporte... 27 7.9 At4g25210.1 68417.m03628 expressed protein weak similarity to st... 27 7.9 At3g63500.2 68416.m07153 expressed protein 27 7.9 At3g53310.1 68416.m05881 transcriptional factor B3 family protei... 27 7.9 At3g01560.1 68416.m00086 proline-rich family protein contains pr... 27 7.9 At2g29610.1 68415.m03597 F-box family protein contains Pfam prof... 27 7.9 At1g71360.1 68414.m08237 expressed protein low similarity to PIR... 27 7.9 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 36.7 bits (81), Expect = 0.010 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDA-KDEPASPQPS-KPQ 364 P+P K+E + +P + + K+E S+Q PP+ +++ K EP P+ S KPQ Sbjct: 480 PKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQ 537 Score = 35.5 bits (78), Expect = 0.023 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAP-PEDKDAKDEPASPQPSKPQ 364 P PT + E E+ N P E S K +E P Q P P+ + EP++P+ KP+ Sbjct: 411 PTPTPKAPEPKKEI-NPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPE 466 Score = 33.5 bits (73), Expect = 0.091 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESD-AKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 P+P K+E + +P E + + K +E P Q P ++ +E PQP K + Sbjct: 502 PKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQE 558 Score = 31.5 bits (68), Expect = 0.37 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +2 Query: 197 PEPTGEKKEGGS-EVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 P+P K+E E +P ++ K +E P Q P ++ +E PQP K + Sbjct: 534 PKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQE 590 Score = 30.7 bits (66), Expect = 0.64 Identities = 14/56 (25%), Positives = 25/56 (44%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 PE + + + E +P ++ K +E P Q P ++ +E PQP K + Sbjct: 519 PEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQE 574 Score = 29.9 bits (64), Expect = 1.1 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +2 Query: 197 PEPTGEKKEG--GSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 P+P K+E + K +P ++ K + EQ P+ + K E + +P KP+ Sbjct: 463 PKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPE 520 Score = 27.1 bits (57), Expect = 7.9 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPA---SPQPSKPQ 364 P+ K E S + P E + K + +EQ P+ + K E +P+P +P+ Sbjct: 443 PQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPK 501 >At5g24580.1 68418.m02902 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 319 Score = 34.7 bits (76), Expect = 0.039 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLW 373 E KE S + P E EE V EE A E ++EP P P P +L+ Sbjct: 8 EAKEAASAPQAVPAEEEEKKKDVAEEKKVAAEEEKPKEEEEPQPPPPPPPFILY 61 >At5g24580.2 68418.m02903 copper-binding family protein similar to copper homeostasis factor gi:3168840 from Arabidopsis thaliana; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 318 Score = 33.1 bits (72), Expect = 0.12 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLW 373 KE S + P E EE V EE A E ++EP P P P +L+ Sbjct: 9 KEAASAPQAVPAEEEEKKKDVAEEKKVAAEEEKPKEEEEPQPPPPPPPFILY 60 >At1g49490.1 68414.m05547 leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 847 Score = 32.7 bits (71), Expect = 0.16 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +2 Query: 203 PTGEKKEGGSEVKNEPMEVEESDAKVKEEPS-EQAPPEDKDAKDEPASPQPSKP 361 P E+ E E+ + + +K ++ P EQ PE+ ++P P+P+KP Sbjct: 443 PKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKP 496 Score = 30.7 bits (66), Expect = 0.64 Identities = 15/56 (26%), Positives = 23/56 (41%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 P P + K EP+ + SD+ E P P K + SP+P +P+ Sbjct: 394 PSPNPPRTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPE 449 Score = 29.9 bits (64), Expect = 1.1 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQ-APPEDKDAKDEP---ASPQPSKPQ 364 P P + + S EP E K KE P Q + PED ++P SP+P +PQ Sbjct: 431 PSPKPQPPKHESPKPEEPENKHELP-KQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQ 489 Query: 365 L 367 + Sbjct: 490 I 490 Score = 27.9 bits (59), Expect = 4.5 Identities = 13/56 (23%), Positives = 22/56 (39%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 P+P+ K + +P + +P E + + E PQPSKP+ Sbjct: 414 PKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKPE 469 >At3g03680.1 68416.m00371 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 1017 Score = 32.3 bits (70), Expect = 0.21 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKN-EPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLW 373 P + ++G E + + E +E D K +E+P E+A P++K D P + KP Sbjct: 158 PPEIAKAEDGKKETEAAKTEEKKEGDKKEEEKPKEEAKPDEKKP-DAPPDTKAKKPDTAV 216 Query: 374 TP 379 P Sbjct: 217 AP 218 >At5g17980.1 68418.m02109 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 1049 Score = 31.9 bits (69), Expect = 0.28 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVEESDAKVKEE-PSEQAPPEDKDAKDEPASPQPSKPQL 367 E T E K G + P E + A+VKE Q PPE+ + P + + P L Sbjct: 155 EKTEETKAEGPDESKPPPETNDIPAEVKETVKPPQPPPEESSPAEGPKPDEEASPPL 211 >At5g41950.1 68418.m05108 expressed protein Length = 565 Score = 31.5 bits (68), Expect = 0.37 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDK----DAKDEPASPQPSKPQ 364 P+ TGE E +++ E ++ E +DAK +E SE P E K DAK E A + KP+ Sbjct: 35 PKLTGEIPEIEADLTPEEVQSEVTDAKPEEVQSEVKPEEVKTVVTDAKPEEAQSE-VKPE 93 >At5g17710.2 68418.m02076 co-chaperone grpE family protein similar to co-chaperone CGE1 precursor isoform a [Chlamydomonas reinhardtii] GI:15384277; contains Pfam profile PF01025: co-chaperone GrpE Length = 326 Score = 31.1 bits (67), Expect = 0.48 Identities = 17/49 (34%), Positives = 30/49 (61%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPAS 343 P +GE + +EV++ EV+E+D V E +E A E+ +A++E A+ Sbjct: 63 PFASGEAETTETEVESNEPEVQETDGAVDVE-NENASAEEGEAEEEEAA 110 >At4g31920.1 68417.m04535 two-component responsive regulator family protein / response regulator family protein contains Pfam profile: PF00072 response regulator receiver domain Length = 552 Score = 31.1 bits (67), Expect = 0.48 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLWT 376 K+ S V N ++++ K KE+ E+ E + D+P + + KP++LWT Sbjct: 139 KKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQK--KPRVLWT 189 >At2g47620.1 68415.m05941 SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain Length = 512 Score = 31.1 bits (67), Expect = 0.48 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +1 Query: 448 EERKIKSLVALLVETQMKKLEIKLSIL 528 EER+++ L A ++E Q+KKL+ KL L Sbjct: 439 EEREMEQLAATVIEQQLKKLQSKLKFL 465 >At5g64910.1 68418.m08165 expressed protein ; expression supported by MPSS Length = 487 Score = 30.7 bits (66), Expect = 0.64 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEV---EESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 E ++E ++V+++ E EE + KEE E+A EDK+ ++E P S Q Sbjct: 70 EANENQEEEAAKVESKAAEEGGNEEEAKEDKEEEKEEAAREDKEEEEEAVKPDESASQ 127 >At3g14670.1 68416.m01856 hypothetical protein Length = 232 Score = 30.7 bits (66), Expect = 0.64 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +2 Query: 209 GEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 GEK + E +E E EES+ + EE ++ ++++ K+E Sbjct: 71 GEKSDNNEEENSEKDEKEESEEEESEEEEKEEEEKEEEEKEE 112 >At5g63550.1 68418.m07976 expressed protein Length = 530 Score = 30.3 bits (65), Expect = 0.85 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSK 358 P T E K+ G + E D EE S+ + D KDE +PSK Sbjct: 285 PSDTEEGKDEGDADSEGTNDPHEEDDAAPEEESDHEKTDTDDEKDEVEVEKPSK 338 >At5g63530.1 68418.m07974 copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840]; nearly identical to farnesylated protein ATFP3 [GI:4097547]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 355 Score = 30.3 bits (65), Expect = 0.85 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Frame = +2 Query: 197 PEPTGEKK--EGGSEVKNEPMEVEESDAKVKEEPSEQAPPE---DKDAKDE--PASPQPS 355 PE EKK E E K E E ++ DA+ K E S++ P E +KD+K++ PA+P+ Sbjct: 8 PEAAEEKKMEEKKPEEKKEG-EDKKVDAEKKGEDSDKKPQEGESNKDSKEDSAPAAPEAP 66 Query: 356 KP 361 P Sbjct: 67 AP 68 Score = 30.3 bits (65), Expect = 0.85 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKP 361 EKKEG + + + E+SD K +E S + ED A P +P P P Sbjct: 23 EKKEGEDKKVDAEKKGEDSDKKPQEGESNKDSKED-SAPAAPEAPAPPPP 71 >At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Common family members At5g09530, At5g09520, At1g44222 [Arabidopsis thaliana] Length = 144 Score = 30.3 bits (65), Expect = 0.85 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 233 EVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASP-QPSKP 361 EVK P E + +V EEP E PE+ + +EP P +P P Sbjct: 42 EVKKVPEYTEPEEPEVPEEP-ELPSPEEPEIPEEPEIPEEPEVP 84 Score = 27.9 bits (59), Expect = 4.5 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +2 Query: 275 KVKEEPSEQAPPEDKDAKDEPASPQPSKPQL 367 +VK+ P E PE+ + +EP P P +P++ Sbjct: 42 EVKKVP-EYTEPEEPEVPEEPELPSPEEPEI 71 >At4g26630.1 68417.m03837 expressed protein Length = 763 Score = 30.3 bits (65), Expect = 0.85 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 233 EVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 E K E + EE A+ KEE E+ K E +PQPS+ + Sbjct: 525 EEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESE 568 Score = 29.1 bits (62), Expect = 2.0 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 E ++ GSE +N+ +VE DA KE+ E+ + +D K+E Sbjct: 241 EDEKEGSEDENDNEKVESKDA--KEDEKEETNDDKEDEKEE 279 >At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) family protein contains similarity to polycomb-M33 interacting protein Ring1B [Mus musculus] GI:2239142; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger) Length = 486 Score = 29.9 bits (64), Expect = 1.1 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 + T E+KEG EVK++ E EE VK +E+ D +DE Sbjct: 36 DETKEEKEGDEEVKHD--EAEEDQEVVKPNDAEEDDDGDDAEEDE 78 >At1g22882.1 68414.m02857 expressed protein Length = 660 Score = 29.9 bits (64), Expect = 1.1 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEES-------DAKVKEEPSEQAPPEDKDAKDEPASPQPS 355 +EG SE K +PM+ ES D E ++APPE+ AK E + + S Sbjct: 423 REGDSEHKEKPMQQIESLEGDDGADKSTHREKEKEAPPENMLAKTEASMAKSS 475 >At1g20610.1 68414.m02575 cyclin, putative similar to G2/mitotic-specific cyclins (B-like cyclin) from {Medicago varia} SP|P46278, SP|P46277; contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain Length = 429 Score = 29.9 bits (64), Expect = 1.1 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKE--EPSEQAPPEDKDAKDEP 337 KEGG NEPM V+ ++A ++E + ++ ED D ++EP Sbjct: 120 KEGGDS--NEPMFVQHTEAMLEEIEQMEKEIEMEDADKEEEP 159 >At3g04450.1 68416.m00472 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain Length = 438 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = +2 Query: 230 SEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLWTP 379 S+V+ + ++ + + + E +AK PAS SK ++ WTP Sbjct: 196 SKVQTQSSDIARQEIVFRNQHQVDPSMEPFNAKSPPASSMTSKQRMRWTP 245 >At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin my5A (SP:Q02440) {Gallus gallus} Length = 1770 Score = 29.5 bits (63), Expect = 1.5 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLWTPS 382 K+ E E + E S+ E+PSE+ PPE ++ +S + S+ L PS Sbjct: 1471 KDSSHEFSAETLSAESSEQNSPEKPSEENPPE--KLSEDNSSGKLSEDYLAAKPS 1523 >At2g22080.1 68415.m02622 expressed protein Length = 177 Score = 29.5 bits (63), Expect = 1.5 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAK 328 E E +GG E +E EVEE + + E+ E P K K Sbjct: 135 EDEDENDDGGEEDDDEDAEVEEEEEEEDEDDEEALQPPKKRKK 177 >At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 983 Score = 29.1 bits (62), Expect = 2.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 448 EERKIKSLVALLVETQMKKLEIKLSI 525 EE +I+ L L+E Q+ KLE KLSI Sbjct: 851 EEDQIRQLSGSLIEKQLHKLEAKLSI 876 >At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 985 Score = 29.1 bits (62), Expect = 2.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 448 EERKIKSLVALLVETQMKKLEIKLSI 525 EE +I+ L L+E Q+ KLE KLSI Sbjct: 853 EEDQIRQLSGSLIEKQLHKLEAKLSI 878 >At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam domains PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain and PF00569: Zinc finger, ZZ type Length = 985 Score = 29.1 bits (62), Expect = 2.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 Query: 448 EERKIKSLVALLVETQMKKLEIKLSI 525 EE +I+ L L+E Q+ KLE KLSI Sbjct: 853 EEDQIRQLSGSLIEKQLHKLEAKLSI 878 >At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile PF03384: Drosophila protein of unknown function, DUF287 Length = 734 Score = 29.1 bits (62), Expect = 2.0 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVE--ESDAKVKEEPSEQAPPEDKDAKDEPASPQ 349 E GE++E +EPM E + + +E+ E+ PE+ D +++P P+ Sbjct: 114 EKEGEEEESEEIDDDEPMPSHGMEENPQEEEKEREEENPEELDDEEQPMQPK 165 Score = 27.5 bits (58), Expect = 6.0 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 200 EPTGEKKEGGSEVKN-EPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPS 355 E GE++E E + EPM+ + + KEE E E ++ D+ P PS Sbjct: 83 EKEGEEEEESEEGDDVEPMQSQGMEENPKEEEKEGEEEESEEIDDD--EPMPS 133 >At3g18690.1 68416.m02374 VQ motif-containing protein contains PF05678: VQ motif Length = 222 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +2 Query: 248 PMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLWTPS 382 P+ V + K+K+ P APP + +D+P P +P +++ S Sbjct: 31 PLSVHKDSHKIKKPPKHPAPPPN---RDQPPPYIPREPVVIYAVS 72 >At3g05900.1 68416.m00664 neurofilament protein-related similar to NF-180 (GI:632549) [Petromyzon marinus] similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) [Homo sapiens] Length = 673 Score = 29.1 bits (62), Expect = 2.0 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +2 Query: 233 EVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQ-PSKPQLLWTP 379 E +P++ E DA + E+A E+K DEPA+ + PS+ +P Sbjct: 325 ESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESSAALSP 374 >At1g21700.1 68414.m02717 SWIRM domain-containing protein / DNA-binding family protein contains similarity to SWI/SNF complex 170 KDa subunit [Homo sapiens] gi|1549241|gb|AAC50694; contains Pfam domain PF04433: SWIRM domain, PF00249: Myb-like DNA-binding domain Length = 807 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 2 VMSTVAFLASVVDPRIAAKATKAAM 76 VM+ VAFLAS V PR+AA ++ Sbjct: 503 VMALVAFLASAVGPRVAASCAHESL 527 Score = 27.9 bits (59), Expect = 4.5 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = +1 Query: 448 EERKIKSLVALLVETQMKKLEIKL 519 EER+I+ L A +V Q+K++E+KL Sbjct: 601 EEREIQRLSANIVNHQLKRMELKL 624 >At5g55660.1 68418.m06940 expressed protein similar to unknown protein (pir||T08929) Length = 778 Score = 28.7 bits (61), Expect = 2.6 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVEESDAKV-----KEEPSEQAPPEDK-DAKDEPASPQPSKP 361 EP E K+ S+ +NE E E+ D K KE+ E++ +DK D K+E + K Sbjct: 232 EPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEKEESNDDKEDKK 291 Query: 362 Q 364 + Sbjct: 292 E 292 >At5g22650.2 68418.m02647 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 223 Score = 28.7 bits (61), Expect = 2.6 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 PE + E+ E E ++E + E V E+ S+ E++D++DE P KP+ Sbjct: 69 PE-SDEEDESDDEDESEEDDDSEKGMDVDEDDSDD--DEEEDSEDEEEEETPKKPE 121 Score = 27.1 bits (57), Expect = 7.9 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 P PT G N V ++D K K +P+E P E+K DE Sbjct: 33 PAPTAVTANG-----NAGAAVVKADTKPKAKPAEVKPAEEKPESDE 73 >At5g22650.1 68418.m02646 expressed protein non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; Length = 306 Score = 28.7 bits (61), Expect = 2.6 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 PE + E+ E E ++E + E V E+ S+ E++D++DE P KP+ Sbjct: 152 PE-SDEEDESDDEDESEEDDDSEKGMDVDEDDSDD--DEEEDSEDEEEEETPKKPE 204 Score = 27.1 bits (57), Expect = 7.9 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 P PT G N V ++D K K +P+E P E+K DE Sbjct: 116 PAPTAVTANG-----NAGAAVVKADTKPKAKPAEVKPAEEKPESDE 156 >At5g16030.1 68418.m01874 expressed protein Length = 339 Score = 28.7 bits (61), Expect = 2.6 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSK 358 E+KE E + + M EE + + +EE + + +DK+ +DE + +K Sbjct: 256 EEKE--KEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTK 302 >At5g59570.1 68418.m07465 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain Length = 298 Score = 28.3 bits (60), Expect = 3.4 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 242 NEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSK-PQLLWTP 379 ++P + ++SD + E + E+ D+ E AS + SK P+L+WTP Sbjct: 103 SDPKKQKKSDGG-EAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTP 148 >At5g53880.1 68418.m06702 expressed protein Length = 66 Score = 28.3 bits (60), Expect = 3.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPM-EVEESDAKVKEEPSEQAPPEDKDAKDEPA 340 P+P K G ++ K E EV++ + K KEE E+ E K+ K E A Sbjct: 18 PKPGKPKAVGDTKPKEEKKKEVKKEEIK-KEEKKEEKKEEKKETKAEKA 65 >At3g07195.1 68416.m00858 proline-rich family protein Length = 225 Score = 28.3 bits (60), Expect = 3.4 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +2 Query: 242 NEPMEVEESDAKVKEEPSEQAPPEDKDAK--DEPASPQPSK 358 N+ ++ ES K + +P E APP + A+ +P +P+P K Sbjct: 30 NKRQDLYESIEKPETKPQELAPPPPQPARRIQKPEAPKPVK 70 >At1g30810.1 68414.m03767 transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein contains similarity to Swiss-Prot:P29375 retinoblastoma-binding protein 2 (RBBP-2) [Homo sapiens]; contains Pfam domains PF02375: jmjN domain and PF02373: jmjC domain; intron between exons 6 and 7 was required to circumvent a frameshift. There could be an underlying sequence error. Length = 787 Score = 28.3 bits (60), Expect = 3.4 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 251 MEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 ME ++++KE+ S + P DKD + QPS P+ Sbjct: 1 MENPPLESEIKEDMSLKNHPPDKDKDKDTIMEQPSSPR 38 >At5g17910.1 68418.m02100 expressed protein Length = 1342 Score = 27.9 bits (59), Expect = 4.5 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDA 325 +EG +E ++E + EE D + K+E E E K A Sbjct: 319 EEGDNENEDEEEDEEEEDEEEKQEKKEDKDDESKSA 354 >At5g11980.1 68418.m01401 conserved oligomeric Golgi complex component-related / COG complex component-related similar to SP|Q96MW5 Conserved oligomeric Golgi complex component 8 {Homo sapiens}; contains Pfam profile PF04124: Dor1-like family Length = 569 Score = 27.9 bits (59), Expect = 4.5 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 233 EVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQLLWTP 379 E N+ +V +D K E + PE+K A++ A + + P L TP Sbjct: 515 EPSNKSPKVISTDTKDASENGVASQPEEKQAENPNAKEEDNSPIPLQTP 563 >At5g03380.1 68418.m00291 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP2 [GI:4097545]; contains Pfam profile PF00403: Heavy-metal-associated domain Length = 392 Score = 27.9 bits (59), Expect = 4.5 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVK----EEPSEQAPPEDKDAKDEPASPQP 352 P+ GG+E K P EE A+ K E+P E+ + K+ ++ ASP P Sbjct: 95 PKKETPPSSGGAEKKPSPA-AEEKPAEKKPAAVEKPGEKKEEKKKEEGEKKASPPP 149 >At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), putative similar to nucleosome assembly protein 1 [Glycine max] GI:1161252; contains Pfam profile PF00956: Nucleosome assembly protein (NAP) Length = 372 Score = 27.9 bits (59), Expect = 4.5 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 227 GSEVKNEPMEV---EESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQL 367 G ++ E E+ EE D E+ ++ ED D +DE S KP + Sbjct: 297 GEAMEAEDFEIDDDEEDDIDEDEDEEDEEDEEDDDDEDEEESKTKKKPSI 346 >At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-associated herpes-like virus ORF73gene, Kaposi's sarcoma-associated herpesvirus, U52064 Length = 532 Score = 27.5 bits (58), Expect = 6.0 Identities = 13/50 (26%), Positives = 23/50 (46%) Frame = +2 Query: 215 KKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKPQ 364 K G + KNE E E+ + +E +++ +KDA + KP+ Sbjct: 286 KSTGYQQTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEEKPE 335 >At2g40660.1 68415.m05017 tRNA-binding region domain-containing protein similar to SP|Q12904 Multisynthetase complex auxiliary component p43 [Contains: Endothelial-monocyte activating polypeptide II (EMAP-II) (Small inducible cytokine subfamily E member 1)] {Homo sapiens}; contains Pfam profile PF01588: Putative tRNA binding domain Length = 389 Score = 27.5 bits (58), Expect = 6.0 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +2 Query: 221 EGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE---PASPQPSKPQ 364 EG V ++ + K + E ++ ++KDAK E PA P+P+K + Sbjct: 174 EGVKPVDKPDVQPQLGTKKTEPEEPKKNAAKEKDAKKEKKKPAEPEPAKKE 224 >At2g35880.1 68415.m04405 expressed protein Length = 432 Score = 27.5 bits (58), Expect = 6.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 215 KKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDEPASPQPSKP 361 K + E + + ++ +E KVK+E +E+ E+K A A P+ KP Sbjct: 365 KSQPKLETQEKSVKAKEKKKKVKKEEAEKRGEEEK-ATAVAAKPEEQKP 412 >At1g67120.1 68414.m07636 midasin-related similar to Midasin (MIDAS-containing protein) (Swiss-Prot:Q12019) [Saccharomyces cerevisiae]; similar to Midasin (MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo sapiens]; contains Prosite PS00017: ATP/GTP-binding site motif A (P-loop) Length = 5336 Score = 27.5 bits (58), Expect = 6.0 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 197 PEPTGEKKEGGSEVKNEPMEVEESDAKVKEEP-SEQAPPEDKDAKDEPASPQPSKPQL 367 P+ E+ + E+ ++ EVE+ DA +EEP SE ++ D+ + +PS+ + Sbjct: 4674 PDVDNEQIDDDMEM-DKTEEVEKEDANQQEEPCSEDQKHPEEGENDQEETQEPSEENM 4730 >At1g56660.1 68414.m06516 expressed protein Length = 522 Score = 27.5 bits (58), Expect = 6.0 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +2 Query: 209 GEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKD---AKDEPASPQPSKPQ 364 GEK + E + + E +E+D ++KE+ S++ ++KD A+++ P K + Sbjct: 219 GEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKE 273 >At5g48610.1 68418.m06012 expressed protein ; expression supported by MPSS Length = 470 Score = 27.1 bits (57), Expect = 7.9 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESD-AKVKEEPSEQAPPEDKDAKDEPASPQPSKP 361 EKK + K E E + D +K K++ ++ + KD KD+ + KP Sbjct: 17 EKKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKEKGKP 67 >At4g25210.1 68417.m03628 expressed protein weak similarity to storekeeper protein [Solanum tuberosum] GI:14268476; contains Pfam profile PF04504: Protein of unknown function, DUF573 Length = 368 Score = 27.1 bits (57), Expect = 7.9 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +2 Query: 206 TGEKKEGGSEV--KNEPMEVEESDAK--VKEEPSEQAPPEDKDAKDEPASPQPSKP 361 +GE+ E +EV K E + ESD++ + E S PE + AK P +KP Sbjct: 25 SGEESESSAEVPKKVESSQKPESDSEGESESESSSGPEPESEPAKTIKLKPVGTKP 80 >At3g63500.2 68416.m07153 expressed protein Length = 1162 Score = 27.1 bits (57), Expect = 7.9 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -2 Query: 94 DSSKFIHRGFGGFGRDAGVDDR 29 D+S R FGG G D GVDDR Sbjct: 100 DASVSSWRRFGGPGNDFGVDDR 121 >At3g53310.1 68416.m05881 transcriptional factor B3 family protein contains Pfam profile PF02362: B3 DNA binding domain Length = 286 Score = 27.1 bits (57), Expect = 7.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 218 KEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 KE +E++ P+ +SD+ V++E ED D +DE Sbjct: 105 KEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVEDDDDEDE 143 >At3g01560.1 68416.m00086 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 511 Score = 27.1 bits (57), Expect = 7.9 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Frame = +2 Query: 266 SDAKVKEEPSEQAPPE---DKDAKDEPASPQPSKPQ 364 S A + PS Q PP+ ++ EP P PS PQ Sbjct: 259 STAAPSQPPSSQLPPQLPTQFSSQQEPYCPPPSHPQ 294 >At2g29610.1 68415.m03597 F-box family protein contains Pfam profile PF00646: F-box domain Length = 328 Score = 27.1 bits (57), Expect = 7.9 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +2 Query: 200 EPTGEKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPED-KDAKDEPASPQPSK 358 +P +E EVKN P+ EE + P E+ E+ ++ K +PQ K Sbjct: 15 DPNNNPQEEDEEVKNLPIHQEEQKIHNENLPKEKIHNENPQEQKIHNENPQEQK 68 >At1g71360.1 68414.m08237 expressed protein low similarity to PIR|JC7185 chromosome 1 C1orf9 protein [Homo sapiens] Length = 459 Score = 27.1 bits (57), Expect = 7.9 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +2 Query: 212 EKKEGGSEVKNEPMEVEESDAKVKEEPSEQAPPEDKDAKDE 334 E+KE + E E +E +K KE+ E A PE+ KDE Sbjct: 231 EQKEKKTMQAKESFESDEDKSKQKEKEQE-ASPENAVVKDE 270 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,451,835 Number of Sequences: 28952 Number of extensions: 70789 Number of successful extensions: 828 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 794 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 987020800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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