Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0428
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 233 1e-61
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 123 1e-28
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 115 3e-26
10_08_0620 - 19321612-19323237 106 2e-23
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 104 6e-23
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 100 2e-21
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 86 2e-17
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 80 2e-15
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 79 3e-15
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 64 1e-10
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 51 1e-06
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 44 9e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 43 2e-04
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 37 0.019
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 36 0.043
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 29 3.7
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 3.7
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 29 4.9
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 28 8.6
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 233 bits (569), Expect = 1e-61
Identities = 126/242 (52%), Positives = 160/242 (66%), Gaps = 20/242 (8%)
Frame = +1
Query: 55 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 234
++ +LNP AE + AL +NI+AAKG+QDV+KTNLGPKGT+KMLV GAGDIK+TKDGN
Sbjct: 2 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNT 61
Query: 235 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 414
LL EMQIQ+PTA +IAR VL IGEL+KQ++ I EG HPR + +G
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDG 121
Query: 415 FDIARNKSLEVLESMKIPI----EIARENLVDVARTSLKTKV----------------HP 534
FD+A+ +LE LE K + E RE L +ART+L+TKV +
Sbjct: 122 FDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKVGAVCFLAFKLSLLGQLYE 181
Query: 535 SLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMP 714
LAD LTD V+AVL IR P +P+DL MVEIM M+HK +T LV+GLV+DHG+RHPDM
Sbjct: 182 GLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMK 241
Query: 715 KR 720
+R
Sbjct: 242 RR 243
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 123 bits (297), Expect = 1e-28
Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Frame = +1
Query: 112 VNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXX 291
+NI+AA+ + D ++T+LGP+G KM+ SG ++ IT DG +L M + P A ++A
Sbjct: 30 LNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELS 89
Query: 292 XXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI 471
V+L G LL++A +S G HP + +++EVL +M IPI
Sbjct: 90 RSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPI 149
Query: 472 EIA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKP--VDLHMVEIMEMKH 642
E++ R++LV A T+L +KV + +L+ VDA L++ P P +DL + +++
Sbjct: 150 ELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLG 209
Query: 643 KTATETVLVKGLVMDHGARH 702
T +T L++GL+ D A H
Sbjct: 210 GTVDDTELIRGLIFDKKASH 229
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 115 bits (277), Expect = 3e-26
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Frame = +1
Query: 91 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTA 270
R A NI+A K + +++T+LGPKG KML S GD+ IT DG +L +M + + A
Sbjct: 25 RGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIA 84
Query: 271 SLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL 450
L+ V++ G LL+QA+ + G+HP I EG+++A + + L
Sbjct: 85 KLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHL 144
Query: 451 ESMKIPIEIAREN---LVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHM 618
E + E + N LV T+L +K+ L + V AVL + K V+L +
Sbjct: 145 EHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDL 204
Query: 619 VEIMEMKHKTATETVLVKGLVMDHGARHPDMPKR 720
+++ +T LV G+++D HP MPKR
Sbjct: 205 IKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKR 238
>10_08_0620 - 19321612-19323237
Length = 541
Score = 106 bits (255), Expect = 2e-23
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Frame = +1
Query: 112 VNISAAKGIQDVMKTNLGPKGTMKMLVSGA--GD--IKITKDGNVLLHEMQIQHPTASLI 279
+NI+A + + +T+LGP+G KM+ S + GD + IT DG +L M + P A ++
Sbjct: 30 LNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARML 89
Query: 280 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 459
A V+L G LL++A +S G HP + + +++EVL M
Sbjct: 90 ADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGM 149
Query: 460 KIPIEIA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKP--VDLHMVEIM 630
IP+E++ R+ LV A T+L +KV + +L+ VDA L + P P +DL + ++
Sbjct: 150 AIPVELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLLDLRDIRVV 209
Query: 631 EMKHKTATETVLVKGLVMDHGARH 702
+ T +T L++GLV++ A H
Sbjct: 210 KKLGCTVDDTELIRGLVLNKKASH 233
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 104 bits (250), Expect = 6e-23
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
NI AAK + D+++T LGP+ +KML+ AG I +T DGN +L E+ + HP A +
Sbjct: 26 NIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHPAAKSMIELSR 85
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 474
++L GE+L A FI + HP +I + A + +L VL+ + IP++
Sbjct: 86 TQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVD 145
Query: 475 I-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLT 582
+ R ++ + ++S+ TK D++ D +DA T
Sbjct: 146 VDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDATTT 182
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 99.5 bits (237), Expect = 2e-21
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
NI AAK + D+++T LGP+ +KML+ +G I +T DGN +L E+ I HP A +
Sbjct: 26 NIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHPAAKSMIELSR 85
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 474
++L GE+L A+ FI + HP +I + A +L VL+ + + ++
Sbjct: 86 TQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVD 145
Query: 475 I-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLT 582
+ R ++ + ++S+ TK D++ D +DA T
Sbjct: 146 VNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDATTT 182
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 86.2 bits (204), Expect = 2e-17
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +1
Query: 127 AKGIQDVMKTNLGPKGTMKMLVS-GAG-DIKITKDGNVLLHEMQIQHPTASLIARXXXXX 300
A I D++KT LGPKG K+L S G G + +T DG +L + I +P A ++
Sbjct: 25 AMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 84
Query: 301 XXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF----DIARNKSLEVLESMKIP 468
V+L GELL++A+ ++ +HP I G+ + ARN LE K
Sbjct: 85 DDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKEN 144
Query: 469 IEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKT 648
I+ R +L+++A T+L +K+ + + VDAVL ++ +L ++I+++ +
Sbjct: 145 IDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVLRLK---GSTNLEAIQILKIPGGS 201
Query: 649 ATETVLVKGLVMD 687
++ L +G ++D
Sbjct: 202 LKDSFLDEGFILD 214
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/206 (24%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Frame = +1
Query: 100 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 279
+A+ NI A + + + +T+LGP G KM+++ + +T D +++E+++QHP A ++
Sbjct: 22 EAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKIL 81
Query: 280 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 459
+ GELL++A+ I GLHP I G+ A NK++E+LE +
Sbjct: 82 VLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDL 141
Query: 460 ----KIPIEIA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHM-- 618
+++ +E +V + R+++ +K D+L DA + + P P + ++
Sbjct: 142 VEKGSENMDVRNKEEVVLLMRSAVASKQF-GQEDILCPLVADACMQV-CPKNPANFNVDN 199
Query: 619 VEIMEMKHKTATETVLVKGLVMDHGA 696
V + ++ + +V+G+V+ + A
Sbjct: 200 VRVAKLLGGGLHNSSVVRGMVLKNDA 225
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 79.4 bits (187), Expect = 3e-15
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Frame = +1
Query: 58 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 237
I LL + ++ + NI+A + D ++T LGP+G K++ G I+ DG +
Sbjct: 9 IILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATI 68
Query: 238 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 417
+ + I HP A ++ VLL E LK+A +I +G+HP + +
Sbjct: 69 MRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSY 128
Query: 418 DIARNKSLEVLESMKIPI-----EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLT 582
A + ++E ++ + I E +E L A T+L +K+ + VDAVL
Sbjct: 129 RTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLA 188
Query: 583 IRTPGKPVDLHMVEIMEMKHKTATETVLVKGL 678
I + L+++ I ++ T ++ LV G+
Sbjct: 189 ISNDDR---LNLLGIKKVPGGTMRDSFLVNGV 217
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 63.7 bits (148), Expect = 1e-10
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Frame = +1
Query: 64 LLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVS-GAG-DIKITKDGNVL 237
LL A + +A + I D++KT LGPKG K+L S G G + +T DG +
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 238 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 417
L + I +P A ++ V+L GELL++A+ ++ +HP
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHP------- 117
Query: 418 DIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG 597
M I + R +L+++A T+L +K+ + VDAVL ++
Sbjct: 118 -------------MTIIADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLK--- 161
Query: 598 KPVDLHMVEIMEMKHKTATETVLVKGLVMD 687
+L ++I++ + ++ L +G ++D
Sbjct: 162 GSTNLEAIQILKKTGGSLKDSFLDEGFILD 191
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 184 MLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQ 363
MLV GD+ IT DG +L ++++HP A ++ V++ ELLK+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 364 ADIFISEGLHPRIITEGFDIARN 432
+ + +HP I G+ + N
Sbjct: 61 GNDLVRNKIHPTSIISGYRLQYN 83
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 44.4 bits (100), Expect = 9e-05
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Frame = +1
Query: 136 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 303
+ D++ LGPKG +L S G KI DG + E++++ P A L+ +
Sbjct: 75 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 134
Query: 304 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 483
V+L ++ + ++ G +P IT G I + V E K+ E+
Sbjct: 135 DLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRG--IEKTAKALVSELQKMSKEVED 192
Query: 484 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 633
L DVA S ++ +A+ + V+T+ GK + L++VE M+
Sbjct: 193 SELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLE-EGKSAENNLYVVEGMQ 245
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Frame = +1
Query: 136 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 303
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 138
Query: 304 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 483
V+L L+ + ++ G +P IT G + +E L+ K+ E+
Sbjct: 139 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELK--KLSKEVED 196
Query: 484 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRT-PGKPVDLHMVEIMEMK 639
L DVA S ++ +A+ ++ V+T+ +L++VE M+ +
Sbjct: 197 SELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQFE 251
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 36.7 bits (81), Expect = 0.019
Identities = 36/186 (19%), Positives = 81/186 (43%), Gaps = 7/186 (3%)
Frame = +1
Query: 100 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ----IQHPT 267
+A A+ + + + D +K +GPKG ++ G K+TKDG + ++ +++
Sbjct: 80 EARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVG 139
Query: 268 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEV 447
ASL+ + +L + + ++ G++ + G +A ++ +
Sbjct: 140 ASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVVTN 199
Query: 448 LESMKIPIEIARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPV--DLHM 618
L+ M I + E V + + ++ +A + + V+TI T G + +L +
Sbjct: 200 LKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITI-TDGNTLYNELEV 258
Query: 619 VEIMEM 636
VE M++
Sbjct: 259 VEGMKL 264
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 35.5 bits (78), Expect = 0.043
Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 5/191 (2%)
Frame = +1
Query: 82 EFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQH 261
E A A A + + D +K +GPKG ++ K+TKDG + ++ +
Sbjct: 121 EVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFED 180
Query: 262 PT----ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 429
A+L+ + +L +L + ++ G++ + G + A
Sbjct: 181 SAKNVGANLVKQVAEATNKVAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAI 240
Query: 430 NKSLEVLESMKIPIEIARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPV 606
+ L+S I + E N V + + ++ ++ + D V+TI T GK +
Sbjct: 241 SSITTHLKSKAWIINSSEEINQVATISANGEKEIGDLISKAMEKVGKDGVITI-TDGKTL 299
Query: 607 DLHMVEIMEMK 639
D + + MK
Sbjct: 300 DNELEAVQGMK 310
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 334 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIARENLVDVARTS 513
++L E++ + ++ G +P + +G D A ++ + +L++ IP+ +E++ VA S
Sbjct: 655 IILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVS-TKEDIKAVASIS 713
Query: 514 LKTK--VHPSLADVLTDACVDAVLTIRT 591
V +AD L D ++ I +
Sbjct: 714 AGNDEYVGDLIADALEKIGPDGIIKIES 741
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 121 SAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 279
SAA G++ V + L K+ V GD K D +V+ ++ ++PT SL+
Sbjct: 37 SAASGVETVPQLFLKISPEGKVPVFNGGDGKWIPDSDVITQVIEEKYPTPSLV 89
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 34 NVLNEMAAISLLNPKAEFAR--AAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG 198
N L +AA+ LNP AR AA A A + A D +T L P+ + K+ +G
Sbjct: 321 NPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTEKLDSKRTKLSPEESSKIKAAG 377
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 446 TSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMR 339
TS + + +KP V + G K L+N +C S P++
Sbjct: 195 TSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQ 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,661,350
Number of Sequences: 37544
Number of extensions: 366111
Number of successful extensions: 812
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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