Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0428
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 281 4e-76
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 281 4e-76
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 138 5e-33
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 138 5e-33
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 138 5e-33
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 117 7e-27
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 117 7e-27
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 108 3e-24
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 108 3e-24
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 92 3e-19
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 92 3e-19
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 92 3e-19
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 87 9e-18
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 84 1e-16
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 84 1e-16
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 70 2e-12
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 32 0.48
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.63
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.63
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine re... 30 1.9
AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine re... 30 1.9
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 281 bits (689), Expect = 4e-76
Identities = 137/223 (61%), Positives = 168/223 (75%)
Frame = +1
Query: 49 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 228
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 229 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 408
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 409 EGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 588
EGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 589 TPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 717
G+ DLHMVE MEM H + +T LV+GLV+DHGARHPDMP+
Sbjct: 181 RDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPR 223
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 281 bits (689), Expect = 4e-76
Identities = 137/223 (61%), Positives = 168/223 (75%)
Frame = +1
Query: 49 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 228
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 229 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 408
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 409 EGFDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 588
EGF+ A K+LE+LE K + R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 589 TPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 717
G+ DLHMVE MEM H + +T LV+GLV+DHGARHPDMP+
Sbjct: 181 RDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPR 223
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 138 bits (333), Expect = 5e-33
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 100 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 279
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 280 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 459
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 460 --KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 630
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 631 EMKHKTATETVLVKGLVMDHGARHPDMPK 717
+T+LVKG+V+D HP MPK
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 138 bits (333), Expect = 5e-33
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 100 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 279
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 280 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 459
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 460 --KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 630
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 631 EMKHKTATETVLVKGLVMDHGARHPDMPK 717
+T+LVKG+V+D HP MPK
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 138 bits (333), Expect = 5e-33
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Frame = +1
Query: 100 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 279
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 280 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 459
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 460 --KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 630
K P+E RE LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKME 211
Query: 631 EMKHKTATETVLVKGLVMDHGARHPDMPK 717
+T+LVKG+V+D HP MPK
Sbjct: 212 GKVGGRLEDTILVKGIVIDKTMSHPQMPK 240
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 117 bits (282), Expect = 7e-27
Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 3/205 (1%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 474
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 475 IARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEIMEMKHK 645
++ + L++ +A TSL +KV + +L V+AV I V+L M++I++
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGD 215
Query: 646 TATETVLVKGLVMDHGARHPDMPKR 720
T E+ L++G ++D P R
Sbjct: 216 TVEESELIEGALIDQKTMGRGAPTR 240
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 117 bits (282), Expect = 7e-27
Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 3/205 (1%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 474
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 475 IARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEIMEMKHK 645
++ + L++ +A TSL +KV + +L V+AV I V+L M++I++
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGD 215
Query: 646 TATETVLVKGLVMDHGARHPDMPKR 720
T E+ L++G ++D P R
Sbjct: 216 TVEESELIEGALIDQKTMGRGAPTR 240
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 108 bits (260), Expect = 3e-24
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 5/207 (2%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 471
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 472 E-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GK-PVDLHMVEIMEMK 639
+ I R+++V+ A+TS+ +K+ AD + VDA +R GK ++ V +++
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAH 204
Query: 640 HKTATETVLVKGLVMDHGARHPDMPKR 720
K+A E+VLVKG ++ MP R
Sbjct: 205 GKSARESVLVKGYALNCTVASQAMPLR 231
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 108 bits (260), Expect = 3e-24
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 5/207 (2%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 471
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 472 E-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GK-PVDLHMVEIMEMK 639
+ I R+++V+ A+TS+ +K+ AD + VDA +R GK ++ V +++
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAH 204
Query: 640 HKTATETVLVKGLVMDHGARHPDMPKR 720
K+A E+VLVKG ++ MP R
Sbjct: 205 GKSARESVLVKGYALNCTVASQAMPLR 231
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 49 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 216
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 217 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 396
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 397 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDA 573
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 574 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 687
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 49 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 216
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 217 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 396
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 397 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDA 573
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 574 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 687
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 92.3 bits (219), Expect = 3e-19
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Frame = +1
Query: 49 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 216
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 217 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 396
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 397 RIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVARTSLKTKVHPSLADVLTDACVDA 573
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 574 VLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMD 687
VL ++ G +L ++I++ + E+ L +G +++
Sbjct: 181 VLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE 215
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 87.4 bits (207), Expect = 9e-18
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Frame = +1
Query: 115 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 294
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 295 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLES-MKIPI 471
++L GE++ A ++ + HP +I + + A ++ E+ +
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTV 147
Query: 472 EIARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG---KPVDL-HMVEIMEM 636
+I + + V ++ L TK+ D+ + + AV TIR + +D+ I ++
Sbjct: 148 DITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIRVEKAGVREIDIKRYCRIEKI 207
Query: 637 KHKTATETVLVKGLVMDHGARHPDMPKR 720
++ +VKG+V++ H M +R
Sbjct: 208 PGGRIEDSQVVKGIVVNKDILHAKMRRR 235
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 83.8 bits (198), Expect = 1e-16
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +1
Query: 58 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 237
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 238 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 417
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 418 DIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 588
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL- 184
Query: 589 TPGKPVDLHMVEIMEMKHKTATETVLVKGL 678
+ L+M+ I ++ E+ L+KG+
Sbjct: 185 --DAHLPLNMIGIKKVNGGNLHESRLIKGV 212
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 83.8 bits (198), Expect = 1e-16
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +1
Query: 58 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 237
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 238 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 417
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 418 DIARNKSLEVLESMKIPIE---IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 588
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL- 184
Query: 589 TPGKPVDLHMVEIMEMKHKTATETVLVKGL 678
+ L+M+ I ++ E+ L+KG+
Sbjct: 185 --DAHLPLNMIGIKKVNGGNLHESRLIKGV 212
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Frame = +1
Query: 85 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 264
F +A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHP 80
Query: 265 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE 444
A +I V+L LL+ A I G+ P+ + G++ A K+LE
Sbjct: 81 AARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALE 140
Query: 445 VLESMKIPIEIARENLVDV---ARTSLKTKVHPS---LADVLTDACV 567
+L ++ + +N+ +V R+++ +K + + +AD++ ACV
Sbjct: 141 ILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV 187
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 655 ETVLVKGLVMDHGARHPDMPK 717
+T+LVKG+V+D HP MPK
Sbjct: 14 DTILVKGIVIDKTMSHPQMPK 34
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 88 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 267
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 268 ASLIAR 285
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 88 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 267
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 268 ASLIAR 285
+L A+
Sbjct: 82 QNLGAK 87
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 488 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 336
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 488 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 336
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>AC024800-2|AAF60723.2| 320|Caenorhabditis elegans Serpentine
receptor, class h protein305 protein.
Length = 320
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = -3
Query: 690 MIHY*TFYKYSFSSRLVFHLHNFNHVQINRFAW 592
+++Y Y +SF+ + F++HN + V++ +FA+
Sbjct: 146 ILYYAANYLFSFTVMVSFYIHNSDQVELRKFAF 178
>AC024800-1|AAF60725.1| 320|Caenorhabditis elegans Serpentine
receptor, class h protein57 protein.
Length = 320
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = -3
Query: 690 MIHY*TFYKYSFSSRLVFHLHNFNHVQINRFAW 592
+++Y Y +SF+ + F++HN + V++ +FA+
Sbjct: 146 ILYYAANYLFSFTVMVSFYIHNSDQVELRKFAF 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,856,169
Number of Sequences: 27780
Number of extensions: 314947
Number of successful extensions: 750
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -