Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0422
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 429 e-121
SB_56| Best HMM Match : Actin (HMM E-Value=0) 429 e-120
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 429 e-120
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 428 e-120
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 424 e-119
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 324 4e-89
SB_54| Best HMM Match : Actin (HMM E-Value=0) 239 1e-63
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 2e-59
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 201 4e-52
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 189 2e-48
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 122 2e-33
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 111 5e-25
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 9e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 59 3e-09
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.28
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.28
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.37
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 32 0.49
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.0
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 30 2.0
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 29 2.6
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 29 2.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 3.4
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19) 29 3.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.5
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.5
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.5
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 6.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 6.0
SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2) 28 6.0
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_10205| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 7.9
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 7.9
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 28 7.9
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 28 7.9
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 7.9
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 429 bits (1057), Expect = e-121
Identities = 204/213 (95%), Positives = 210/213 (98%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 94 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLM 153
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 154 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI 213
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA
Sbjct: 214 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 273
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGG
Sbjct: 274 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGG 306
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 429 bits (1056), Expect = e-120
Identities = 204/213 (95%), Positives = 210/213 (98%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 131 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 190
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI 250
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 251 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 310
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGG
Sbjct: 311 DRMQKEITSLAPPTMKIKIIAPPERKYSVWIGG 343
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 429 bits (1056), Expect = e-120
Identities = 204/213 (95%), Positives = 210/213 (98%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITI 251
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 311
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGG
Sbjct: 312 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGG 344
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 428 bits (1054), Expect = e-120
Identities = 203/213 (95%), Positives = 210/213 (98%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLM 191
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITI 251
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIA 311
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGG
Sbjct: 312 DRMQKEITSLAPPTMKIKIIAPPERKYSVWIGG 344
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 424 bits (1044), Expect = e-119
Identities = 202/213 (94%), Positives = 210/213 (98%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 131 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 190
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
KILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITI
Sbjct: 191 KILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITI 250
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIA
Sbjct: 251 GNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 310
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEI+ALAP TMKIKIIAPPERKYSVWIGG
Sbjct: 311 DRMQKEISALAPPTMKIKIIAPPERKYSVWIGG 343
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 324 bits (796), Expect = 4e-89
Identities = 168/213 (78%), Positives = 176/213 (82%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
AMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV--------------- 164
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITI
Sbjct: 165 PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITI 224
Query: 362 GNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 541
GNERFRCPEAL QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+A
Sbjct: 225 GNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLA 284
Query: 542 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
DRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 DRMQKEISALAPSTMKIKIIAPPERKYSVWIGG 317
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 239 bits (586), Expect = 1e-63
Identities = 108/170 (63%), Positives = 135/170 (79%)
Frame = +2
Query: 5 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 184
MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +
Sbjct: 2177 MYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQR 2236
Query: 185 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 364
++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG
Sbjct: 2237 LVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIG 2296
Query: 365 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 514
+ERFR E LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2297 SERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 225 bits (551), Expect = 2e-59
Identities = 100/189 (52%), Positives = 136/189 (71%)
Frame = +2
Query: 5 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 184
+Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK 195
Query: 185 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIG 364
++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ +
Sbjct: 196 LMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLS 255
Query: 365 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 544
ERF PEALFQP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+
Sbjct: 256 GERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPS 315
Query: 545 RMQKEITAL 571
R+++EI L
Sbjct: 316 RLEREIKQL 324
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 201 bits (491), Expect = 4e-52
Identities = 91/113 (80%), Positives = 103/113 (91%)
Frame = +2
Query: 302 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 481
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 482 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGG
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGG 117
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 189 bits (460), Expect = 2e-48
Identities = 89/97 (91%), Positives = 94/97 (96%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
A+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 10 AVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLM 69
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 292
K++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 70 KLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 122 bits (293), Expect(2) = 2e-33
Identities = 60/120 (50%), Positives = 86/120 (71%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
A+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL
Sbjct: 157 ALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLR 216
Query: 182 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 361
+L + G+ F +++E EIVR IKE+ S S + Y LPDG +I +
Sbjct: 217 LLLRKEGHCFHSSSELEIVRTIKEE----------------SMESERQQYALPDGSIIEV 260
Score = 38.3 bits (85), Expect(2) = 2e-33
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 452 SIMKCDVDIRKDLYANTVLSGGTTMYPG 535
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 111 bits (267), Expect = 5e-25
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 20 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 196
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 197 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 376
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 377 RCPEALFQPSFL 412
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 9e-13
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +2
Query: 14 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 169
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 170 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 295
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Frame = +2
Query: 353 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 529
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 530 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGG 640
R+Q++I + P ++ ++I+ ++Y+VW GG
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGG 308
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +2
Query: 413 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 592
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 593 KII---APPERKYSVWIGG 640
K+I + E++++ WIGG
Sbjct: 206 KLISNNSSVEKRFNPWIGG 224
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +2
Query: 2 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 181
A ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 64 AFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCR 123
Query: 182 KILTE 196
++ E
Sbjct: 124 QMFEE 128
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Frame = +2
Query: 449 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 604
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 605 PP-ERKYSVWIGG 640
PP + W+GG
Sbjct: 124 PPVNANITAWLGG 136
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.7 bits (71), Expect = 0.28
Identities = 41/135 (30%), Positives = 52/135 (38%), Gaps = 3/135 (2%)
Frame = +3
Query: 9 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTPSCVWTWPVVXXXXXX 179
++PS PC+ T P P P + TP+T S TPC PST T S TP T P
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TPITPRT-PSTPCTHST 430
Query: 180 XXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSP 359
+T S ++ ST S P P+ PS T P+ S+P
Sbjct: 431 PGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPST--PSTPSTP 488
Query: 360 SETKDSVAQRLSSNP 404
S S S P
Sbjct: 489 STPSTSSTPSTPSTP 503
Score = 31.5 bits (68), Expect = 0.64
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
Frame = +3
Query: 9 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHS-------PTPSCVWTWPV 158
++PS PC+ T P P P + TP+T S TPC PST T S P+ C + P
Sbjct: 10 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPSTPSTPCTHSTPS 67
Query: 159 VXXXXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSR-SLTN 335
S S ++ ST S P P+ PS S +
Sbjct: 68 APSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPS 127
Query: 336 FPTVRSSPSETKDSVAQRLSSNP 404
P+ S+PS S P
Sbjct: 128 APSTPSTPSTPSTPSTPSTPSTP 150
Score = 30.7 bits (66), Expect = 1.1
Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Frame = +3
Query: 12 SPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVXXXXXXXX 185
+PS P + CT P P P + TP+T S TPC + + TPS T P
Sbjct: 32 TPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPSTPST-PCTPSTPSTPS 88
Query: 186 XXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSR-SLTNFPTVRSSPS 362
S S ++ ST S P P+ PS S + P+ S+PS
Sbjct: 89 TPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPS 148
Query: 363 ETKDSVAQRLSSNP 404
S P
Sbjct: 149 TPSTPSTPSTPSTP 162
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 246 SRRSCATSLSTSSRRWPPLHPAAPSR-SLTNFPTVRSSPSETKDSVAQRLSSNP 404
S RS ++ ST S P P+ PS SLT+ P+ S+PS + + P
Sbjct: 647 STRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTP 700
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 9 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 155
T+P+ P + T P P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 164 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 343
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 344 GQVITIGNERFRCP 385
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 3 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 128
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 3 PCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 101
PCT PC+ CT P +TP+T TPC
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 3 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 101
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 15 PSKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 137
P+ P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 322 PNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 56 TGIVLDSGDGVSHTVPI 106
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 255 SCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSV 380
SCA S S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 383 PEALFQPSFLGMEACGIHET 442
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 137
P P P + TRP VP +T PTP P T P P+
Sbjct: 920 PPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -2
Query: 156 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 19
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 156 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 19
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 156 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 19
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 101
P T PS P C + P C+T T+SP PC
Sbjct: 671 PATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 101
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 15 PSKPCSRCTRPVVPP 59
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 12 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 137
SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 60 SPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 SPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 137
+P+KP P + TP T SPT P +T +PTP+
Sbjct: 35 TPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 12 SPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPT 131
+P+KP P P + TP +P TP P+ T H+PT
Sbjct: 101 TPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 131
P T K + T + P TP PTP T T +PT
Sbjct: 76 PTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 261 ATSLSTSSRRWPPLH-PAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 413
AT+L T + W P H P +++L P S PS A L + P+ W
Sbjct: 242 ATTLGTKPQPWGPSHNPGDQAKTLGTKPQ-PSGPSHNPRDQATTLGTKPKPW 292
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 101
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 3 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 107
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/108 (25%), Positives = 40/108 (37%)
Frame = +3
Query: 45 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVXXXXXXXXXXXXXXXXXXXXX 224
P P + +T T S TP PS T S TP+ +T P
Sbjct: 30 PSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYT-PTTSYTPTTSYTPTPSYTPTTSYT 87
Query: 225 XGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSET 368
S+ ++ T+ TS+ + P P+ S T P+ S+ S T
Sbjct: 88 PTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYT 135
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = -1
Query: 289 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGVGECVS- 113
+++ V V ++L V + G G + + + +D V + G+V GVG+
Sbjct: 15 MVVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADG 72
Query: 112 -LVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 2
+ D GVGD G D GG GRV + G+ D G
Sbjct: 73 RVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +2
Query: 62 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 241
+V+D+G +H VP++ G + A+ R + +L E +F ++
Sbjct: 359 LVVDTGYSFTHIVPVFNGKVIKKAVRRQ-----------LHVLDE---TF-------VIN 397
Query: 242 DIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 343
+KE CYV+ F ++M A +++ + Y LPD
Sbjct: 398 QVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 289 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGV 128
L+LEV+ + + L D+ ND+PL G V+ +D+ C+ + Q G+
Sbjct: 34 LILEVDLEYPKSLYDLHNDYPLAAGKVNVS---KDMLSEYCDKIATKYGIQTGL 84
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 255 SCATSLSTSSRRWPPL---HPAAPSRSLTN 335
SC ++LS SR W +PAAP+RS+T+
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 291
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 255 SCATSLSTSSRRWPPL---HPAAPSRSLTN 335
SC ++LS SR W +PAAP+RS+T+
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 405
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 9 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 113
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 289 LLLEVESDVAQLLLDVTN---DFPLGGGSERVAALGEDLHEVVCEVTTGQVQT 140
+LL+ ES+ A +LLD DF G ER+AA E + ++ ++ +QT
Sbjct: 354 VLLDEESEKANMLLDFYTHYKDFRKTAGEERLAAPLEFIRDLPSKILEAYIQT 406
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 351 SSPSETKDSVAQRLSSNPRSWVWK 422
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 36 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 137
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19)
Length = 836
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 655 KARIDPTDPYGVLPLWRSNDLNLHCRWG 572
K + +P P +LPL NDL+ WG
Sbjct: 199 KLKFNPRPPVAILPLGTGNDLSRALNWG 226
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 146
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 39 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 155
T VVPP+ P V P+P + SPTPSC+ P
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQP 240
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 248 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 388
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 15 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 158
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 12 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 134
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 273 STSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNP 404
S+++R PP P P++ PT + S++ A L NP
Sbjct: 799 SSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGENP 842
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 46 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLGRS*PHRLPHE 183
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 497 NTVLSGGTTMYPGIADRMQKEITALAP 577
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 9 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 149
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2)
Length = 226
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = +3
Query: 228 GKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPR 407
GK+ ++R+S ++ TSS P PA+P +LT T+ PS ++D V L S P
Sbjct: 29 GKA-TSTRKSDHSTYKTSSSFKP---PASPVLTLT---TLSRQPSVSED-VDSNLPSPPP 80
Query: 408 SWVWKLAASTRPHITP 455
S VWK+ P P
Sbjct: 81 S-VWKVPEYVEPKWNP 95
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 258 CATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSV 380
CA ++S+ + LH S S ++ PT+ + S T+DSV
Sbjct: 779 CAENISSDQQESMALHTKPKSLSSSDLPTMVVTHSATRDSV 819
>SB_10205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 608 PERKYSVWIGGIDPRLP 658
PE YS+++GG PRLP
Sbjct: 72 PEEHYSLFVGGAHPRLP 88
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 288 RWPPLHPAAPSRSLTNFPTVRSSP 359
R+P +H P+ + + FPT+RS P
Sbjct: 883 RYPAVHSQEPASTTSPFPTLRSMP 906
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 351 SSPSETKDSVAQRLSSNPRSWVWK 422
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 231 KSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLT-NFPTVRSSPSE 365
K+F + R++ S S + PP P PS S PT SPSE
Sbjct: 916 KNFPSPRKTRTPSSHQSPQSAPPSSPCTPSSSTAPPLPTNPKSPSE 961
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 351 SSPSETKDSVAQRLSSNPRSWVWK 422
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -1
Query: 175 VVCEVTTGQVQTQDGVGECVSLVDGHGVGDTVAGVQHDTGGTT 47
+V +T G+ DG G DG GVG G HD GG T
Sbjct: 250 LVVVMTGGETGHDDGDGSGHDDGDGSGVGFRNDGDGHDGGGET 292
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 21 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 140
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 351 SSPSETKDSVAQRLSSNPRSWVWK 422
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 84 VSPTPCPSTRDTHSPTPSCVWTWPV 158
VS TP + + H PTP C +PV
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPV 34
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,049,416
Number of Sequences: 59808
Number of extensions: 589176
Number of successful extensions: 2778
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2723
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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