BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0422 (676 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 249 2e-68 AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 27 0.16 DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 25 0.66 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.5 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.7 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.1 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.1 EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 21 8.1 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.1 >AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. Length = 133 Score = 249 bits (610), Expect = 2e-68 Identities = 117/118 (99%), Positives = 118/118 (100%) Frame = +2 Query: 287 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 466 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC Sbjct: 1 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60 Query: 467 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 640 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGG Sbjct: 61 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGG 118 Score = 23.8 bits (49), Expect = 1.5 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 Query: 639 GSILAFLSTFQQ 674 GSILA LSTFQQ Sbjct: 118 GSILASLSTFQQ 129 >AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. Length = 200 Score = 27.1 bits (57), Expect = 0.16 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = +3 Query: 252 RSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAA 431 ++C TS +T+S L AA + + N+ +SPS T S SS S + + Sbjct: 28 QACTTSPATASLE-SSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTS 86 Query: 432 STRPHIT 452 S P+++ Sbjct: 87 SMYPYVS 93 >DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monooxygenase protein. Length = 499 Score = 25.0 bits (52), Expect = 0.66 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +2 Query: 449 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 628 N +K D DI++ Y + V MYP + M+K I+ + KI I P E K + Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396 Query: 629 WI 634 WI Sbjct: 397 WI 398 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 23.8 bits (49), Expect = 1.5 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 Query: 620 YSVWIGGIDPRLP 658 Y VWI +DP LP Sbjct: 589 YGVWINCLDPNLP 601 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 23.0 bits (47), Expect = 2.7 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%) Frame = +1 Query: 121 TP-PRHPASGLGRS*PHRLPHEDPHRARLLVHYH 219 TP P H G G S H PH A H H Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.8 bits (44), Expect = 6.1 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +1 Query: 502 RIVRWYHHVPWNRRPYAK 555 RI+ +YH +++PY K Sbjct: 424 RIIDYYHSYKMHQKPYNK 441 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.8 bits (44), Expect = 6.1 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +1 Query: 502 RIVRWYHHVPWNRRPYAK 555 RI+ +YH +++PY K Sbjct: 424 RIIDYYHSYKMHQKPYNK 441 >EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate carboxykinase protein. Length = 118 Score = 21.4 bits (43), Expect = 8.1 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -1 Query: 94 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 2 VGD +A ++ D G + E+G G G Sbjct: 42 VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.4 bits (43), Expect = 8.1 Identities = 10/37 (27%), Positives = 19/37 (51%) Frame = +2 Query: 398 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 508 + +FLG+ + +YN + D + KDL+ +L Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 209,480 Number of Sequences: 438 Number of extensions: 4861 Number of successful extensions: 13 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20464920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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