Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0417
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    27   0.69 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.9  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    24   4.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   6.4  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   8.5  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = -3

Query: 214 LSLAYLTCPDL*DAGGRNHVDFYRHLALELTD*HFPR*H*PFWPNILSIKCYKTEKSFNI 35
           L    + C +L  AGG   +  + +     TD   P+ H PF+  + +++C   E S   
Sbjct: 798 LEAGNVVCRELGFAGGAIEIKSHSYFPPNGTDPDEPKQHGPFF-MMDAVRCQGNESSLRE 856

Query: 34  CVF 26
           C F
Sbjct: 857 CSF 859


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 464 QRISSHEISSPSIYLQKECHQ*AQECIEWC 375
           ++ S HE+         ECH+   EC E C
Sbjct: 447 KKSSDHEVMVQKNRNATECHEEGMECSEQC 476


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 501 RFSKFRKGCQTLPENFV 451
           +F + R+GC TLP   V
Sbjct: 401 QFVRIRRGCNTLPNEMV 417


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 306 CLTRIPMPVPKSFSTS*RISARTTPFNTFLCSLMTFFLKI 425
           C   +   +P+ F+T  R+   T    T  C++   F K+
Sbjct: 31  CRAELGGELPEDFATKMRLGDLTLDSETAKCTIQCMFAKV 70


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 503 QDEFVQHMTARIIAKLACWHPQP 571
           QDE +  + ++I+ +  CWHP P
Sbjct: 520 QDEDILVVLSKIMQE--CWHPSP 540


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 588 LHFYLSWLKDQLKTNNNDYI 647
           + FYL   K+ LK  + DYI
Sbjct: 369 IQFYLYGFKESLKATHPDYI 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,404
Number of Sequences: 2352
Number of extensions: 13304
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)