Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0417
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting...   127   3e-29
AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit...   127   3e-29
AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.      127   3e-29
AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump su...   127   3e-29
AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump su...   123   5e-28
AL139244-2|CAI18990.1|  569|Homo sapiens novel protein protein.        31   4.8  

>BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting,
           lysosomal 50/57kDa, V1 subunit H protein.
          Length = 483

 Score =  127 bits (307), Expect = 3e-29
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = +2

Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRG----QKDLPDKN 319
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI     +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 320 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNL 493
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 494 LNRQDEFVQHMTARIIAKLACW 559
           LNRQD F  HM ARIIAKLA W
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAW 151



 Score = 29.9 bits (64), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 564 RSLMDKSDLHFYLSWLKDQLKT 629
           + LM+ SDL++Y +W+K QL +
Sbjct: 153 KELMEGSDLNYYFNWIKTQLSS 174


>AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit H
           protein.
          Length = 483

 Score =  127 bits (307), Expect = 3e-29
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = +2

Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRG----QKDLPDKN 319
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI     +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 320 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNL 493
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 494 LNRQDEFVQHMTARIIAKLACW 559
           LNRQD F  HM ARIIAKLA W
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAW 151



 Score = 29.9 bits (64), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 564 RSLMDKSDLHFYLSWLKDQLKT 629
           + LM+ SDL++Y +W+K QL +
Sbjct: 153 KELMEGSDLNYYFNWIKTQLSS 174


>AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.
          Length = 483

 Score =  127 bits (307), Expect = 3e-29
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = +2

Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRG----QKDLPDKN 319
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI     +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 320 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNL 493
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPI 129

Query: 494 LNRQDEFVQHMTARIIAKLACW 559
           LNRQD F  HM ARIIAKLA W
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAW 151



 Score = 29.9 bits (64), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 564 RSLMDKSDLHFYLSWLKDQLKT 629
           + LM+ SDL++Y +W+K QL +
Sbjct: 153 KELMEGSDLNYYFNWIKTQLSS 174


>AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 483

 Score =  127 bits (307), Expect = 3e-29
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = +2

Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRG----QKDLPDKN 319
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI     +     ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTE 69

Query: 320 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNL 493
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 494 LNRQDEFVQHMTARIIAKLACW 559
           LNRQD F  HM ARIIAKLA W
Sbjct: 130 LNRQDPFTVHMAARIIAKLAAW 151



 Score = 29.9 bits (64), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 564 RSLMDKSDLHFYLSWLKDQLKT 629
           + LM+ SDL++Y +W+K QL +
Sbjct: 153 KELMEGSDLNYYFNWIKTQLSS 174


>AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 476

 Score =  123 bits (297), Expect = 5e-28
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = +2

Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNL-YQRG---QKDLPDKN 319
           +D    T+++  +A+E+R  ++NWQSYLQ QMI+  D +FI     +R    ++++    
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMERSPEEKQEMLQTE 69

Query: 320 PDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNL 493
              CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +
Sbjct: 70  GSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPM 129

Query: 494 LNRQDEFVQHMTARIIAKLACW 559
           LNRQ  F  HM ARIIAKLA W
Sbjct: 130 LNRQVPFTVHMAARIIAKLAAW 151



 Score = 29.9 bits (64), Expect = 8.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 564 RSLMDKSDLHFYLSWLKDQLKT 629
           + LM+ SDL++Y +W+K QL +
Sbjct: 153 KELMEGSDLNYYFNWIKTQLSS 174


>AL139244-2|CAI18990.1|  569|Homo sapiens novel protein protein.
          Length = 569

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +2

Query: 200 IRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDACAEVFLNLLTHI 364
           +R  ++NWQ+Y     I  R +   +   + G   +PD+N  ACA+  L  +  +
Sbjct: 325 LRDPELNWQAYCTRAKIHIRAYLHDLKRAKMGLGGMPDRNHLACAKADLEEVVRV 379


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,373,366
Number of Sequences: 237096
Number of extensions: 1779910
Number of successful extensions: 3732
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3722
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)