Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0417
(657 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052122-1|AAK93546.1| 468|Drosophila melanogaster SD07421p pro... 151 1e-36
AE014134-2756|AAN10957.1| 441|Drosophila melanogaster CG17332-P... 151 1e-36
AE014134-2755|AAF53556.3| 542|Drosophila melanogaster CG17332-P... 151 1e-36
AE014134-2754|AAF53555.2| 468|Drosophila melanogaster CG17332-P... 151 1e-36
AF159457-1|AAD47254.1| 392|Drosophila melanogaster vacuolar ATP... 146 2e-35
AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p pro... 34 0.20
AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA... 34 0.20
AE014296-2653|AAZ66061.1| 179|Drosophila melanogaster CG33795-P... 30 2.4
AE014298-539|ABI30967.1| 604|Drosophila melanogaster CG32792-PD... 29 5.6
AE013599-820|AAF58970.1| 686|Drosophila melanogaster CG8024-PB,... 29 7.3
>AY052122-1|AAK93546.1| 468|Drosophila melanogaster SD07421p
protein.
Length = 468
Score = 151 bits (365), Expect = 1e-36
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Frame = +2
Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDAC 331
IDMIAATSVLQ +A++IR INW SY+QSQMI++ D+ I L + + +N
Sbjct: 12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFLAQNSSQV 70
Query: 332 AEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLNLLNRQ 505
+ LNL++H+SKD TIQYILVL+DD+L ED+SRV +F +T K +W PFLNLLNRQ
Sbjct: 71 VKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQ 130
Query: 506 DEFVQHMTARIIAKLACW 559
D F+ +M++RI+AK ACW
Sbjct: 131 DGFIVNMSSRILAKFACW 148
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 573 MDKSDLHFYLSWLKDQLKTNNNDYIQSV 656
M KSDL+FYL +LKDQL +NNN+YIQSV
Sbjct: 153 MPKSDLNFYLQFLKDQLASNNNEYIQSV 180
>AE014134-2756|AAN10957.1| 441|Drosophila melanogaster CG17332-PD,
isoform D protein.
Length = 441
Score = 151 bits (365), Expect = 1e-36
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Frame = +2
Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDAC 331
IDMIAATSVLQ +A++IR INW SY+QSQMI++ D+ I L + + +N
Sbjct: 12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFLAQNSSQV 70
Query: 332 AEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLNLLNRQ 505
+ LNL++H+SKD TIQYILVL+DD+L ED+SRV +F +T K +W PFLNLLNRQ
Sbjct: 71 VKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQ 130
Query: 506 DEFVQHMTARIIAKLACW 559
D F+ +M++RI+AK ACW
Sbjct: 131 DGFIVNMSSRILAKFACW 148
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 573 MDKSDLHFYLSWLKDQLKTNNNDYIQSV 656
M KSDL+FYL +LKDQL +NNN+YIQSV
Sbjct: 153 MPKSDLNFYLQFLKDQLASNNNEYIQSV 180
>AE014134-2755|AAF53556.3| 542|Drosophila melanogaster CG17332-PB,
isoform B protein.
Length = 542
Score = 151 bits (365), Expect = 1e-36
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Frame = +2
Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDAC 331
IDMIAATSVLQ +A++IR INW SY+QSQMI++ D+ I L + + +N
Sbjct: 12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFLAQNSSQV 70
Query: 332 AEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLNLLNRQ 505
+ LNL++H+SKD TIQYILVL+DD+L ED+SRV +F +T K +W PFLNLLNRQ
Sbjct: 71 VKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQ 130
Query: 506 DEFVQHMTARIIAKLACW 559
D F+ +M++RI+AK ACW
Sbjct: 131 DGFIVNMSSRILAKFACW 148
Score = 37.1 bits (82), Expect = 0.021
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 573 MDKSDLHFYLSWLKDQLKTNNNDYIQSV 656
M KSDL+FYL +LKDQL +N Y+Q +
Sbjct: 153 MPKSDLNFYLQFLKDQLASNGLAYLQEM 180
>AE014134-2754|AAF53555.2| 468|Drosophila melanogaster CG17332-PA,
isoform A protein.
Length = 468
Score = 151 bits (365), Expect = 1e-36
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Frame = +2
Query: 152 IDMIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDAC 331
IDMIAATSVLQ +A++IR INW SY+QSQMI++ D+ I L + + +N
Sbjct: 12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFLAQNSSQV 70
Query: 332 AEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLNLLNRQ 505
+ LNL++H+SKD TIQYILVL+DD+L ED+SRV +F +T K +W PFLNLLNRQ
Sbjct: 71 VKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQ 130
Query: 506 DEFVQHMTARIIAKLACW 559
D F+ +M++RI+AK ACW
Sbjct: 131 DGFIVNMSSRILAKFACW 148
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 573 MDKSDLHFYLSWLKDQLKTNNNDYIQSV 656
M KSDL+FYL +LKDQL +NNN+YIQSV
Sbjct: 153 MPKSDLNFYLQFLKDQLASNNNEYIQSV 180
>AF159457-1|AAD47254.1| 392|Drosophila melanogaster vacuolar ATPase
SFD subunit protein.
Length = 392
Score = 146 bits (355), Expect = 2e-35
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
Frame = +2
Query: 158 MIAATSVLQIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLYQRGQKDLPDKNPDACAE 337
MIAATSVLQ +A++IR INW SY+QSQMI++ D+ I L + + +N +
Sbjct: 1 MIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFLAQNSSQVVK 59
Query: 338 VFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRET--KFSGNVWQPFLNLLNRQDE 511
LNL++H+SKD TIQYILVL+DD+L ED+SRV +F +T K +W PFLNLLNRQD
Sbjct: 60 TLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDG 119
Query: 512 FVQHMTARIIAKLACW 559
F+ +M++RI+AK ACW
Sbjct: 120 FIVNMSSRILAKFACW 135
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 573 MDKSDLHFYLSWLKDQLKTNNNDYIQSV 656
M KSDL+FYL +LKDQL +NNN+YIQSV
Sbjct: 140 MPKSDLNFYLQFLKDQLASNNNEYIQSV 167
>AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p
protein.
Length = 919
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 536 CEQSCAGQIHPDGSANSGRAAKRCQRI 456
C + C G+I PDGSA+ R + C R+
Sbjct: 824 CRRQCGGEIAPDGSADKERVVEFCTRV 850
>AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA
protein.
Length = 919
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 536 CEQSCAGQIHPDGSANSGRAAKRCQRI 456
C + C G+I PDGSA+ R + C R+
Sbjct: 824 CRRQCGGEIAPDGSADKERVVEFCTRV 850
>AE014296-2653|AAZ66061.1| 179|Drosophila melanogaster CG33795-PA
protein.
Length = 179
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 212 QINWQSYLQSQMITQRDHDFIVNL 283
QINW Y + Q++T +DFI NL
Sbjct: 155 QINWSFYKKIQVVTNISYDFIENL 178
>AE014298-539|ABI30967.1| 604|Drosophila melanogaster CG32792-PD
protein.
Length = 604
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 439 LHPRFIFRKNVINEHKNV 386
LHPRF++RK V H+N+
Sbjct: 218 LHPRFMYRKRVPYSHRNI 235
>AE013599-820|AAF58970.1| 686|Drosophila melanogaster CG8024-PB,
isoform B protein.
Length = 686
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 485 LNLLNRQDEFVQHMTARIIAKLACWHPQPDGQK 583
L L+ +Q + + AR +A+LA PQP GQ+
Sbjct: 295 LELMQQQQQRGHRLNARPLAELANTEPQPSGQQ 327
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,825,139
Number of Sequences: 53049
Number of extensions: 572478
Number of successful extensions: 1664
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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