Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0415
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.2
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYN 102
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYN 335
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYN 335
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
+I NN L++ NNYNN N
Sbjct: 80 KIISNNNPLSNNYNYNNNYNNYN 102
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -2
Query: 481 TNLKKKKQHPL*RIKINNARLTSQTPSTNNYNNVN 377
T ++ K+ + NN + ++ NNYNN N
Sbjct: 304 TERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYN 338
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 595 NGLKVCWIYIISLVFFFFNYV 657
+G+ +C+IY L F NYV
Sbjct: 367 DGVCMCFIYASLLEFVCVNYV 387
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 595 NGLKVCWIYIISLVFFFFNYV 657
+G+ +C+IY L F NYV
Sbjct: 336 DGVCMCFIYASLLEFVCVNYV 356
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 595 NGLKVCWIYIISLVFFFFNYV 657
+G+ +C+IY L F NYV
Sbjct: 387 DGVCMCFIYASLLEFVCVNYV 407
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 595 NGLKVCWIYIISLVFFFFNYV 657
+G+ +C+IY L F NYV
Sbjct: 336 DGVCMCFIYASLLEFVCVNYV 356
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 543 TFYTSNVSMICEAADPLKWLKSMLD 617
+F S S+ C AA L+W + D
Sbjct: 13 SFRESRCSVRCSAASGLRWFEIWRD 37
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,116
Number of Sequences: 438
Number of extensions: 3153
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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