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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0415
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   3.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   3.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   3.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   3.6  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   4.7  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   4.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.2  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNSLSNNYNYNNNYNNYN 102


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYN 335


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYN 335


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 445 RIKINNARLTSQTPSTNNYNNVN 377
           +I  NN  L++     NNYNN N
Sbjct: 80  KIISNNNPLSNNYNYNNNYNNYN 102


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 481 TNLKKKKQHPL*RIKINNARLTSQTPSTNNYNNVN 377
           T  ++ K+  +     NN + ++     NNYNN N
Sbjct: 304 TERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYN 338


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 NGLKVCWIYIISLVFFFFNYV 657
           +G+ +C+IY   L F   NYV
Sbjct: 367 DGVCMCFIYASLLEFVCVNYV 387


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 NGLKVCWIYIISLVFFFFNYV 657
           +G+ +C+IY   L F   NYV
Sbjct: 336 DGVCMCFIYASLLEFVCVNYV 356


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 NGLKVCWIYIISLVFFFFNYV 657
           +G+ +C+IY   L F   NYV
Sbjct: 387 DGVCMCFIYASLLEFVCVNYV 407


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 NGLKVCWIYIISLVFFFFNYV 657
           +G+ +C+IY   L F   NYV
Sbjct: 336 DGVCMCFIYASLLEFVCVNYV 356


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 543 TFYTSNVSMICEAADPLKWLKSMLD 617
           +F  S  S+ C AA  L+W +   D
Sbjct: 13  SFRESRCSVRCSAASGLRWFEIWRD 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,116
Number of Sequences: 438
Number of extensions: 3153
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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