Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0410
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.92 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 29  YCCT*QFYNPHILNVA*FI*SCQKHLFLSCVY 124
           +CC   F+N H+L +          LFL C+Y
Sbjct: 182 FCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIY 213



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 35  CT*QFYNPHILNVA*FI*SCQKHLFLSCVY 124
           C   FY  H+L    FI      LFL C+Y
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIY 286



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 541 MNLKFYCTPVVFIPYLFAGIGYYRYA 464
           ++L FYC  ++F  +      Y+ YA
Sbjct: 81  VHLLFYCPFIIFTVHFLLCTYYFYYA 106


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 12  EKRKKNIAVLSSFIILIYLMLLDSFKVVKSIYF 110
           EK +K   +L  FII IY++ + +  V   + F
Sbjct: 32  EKYRKFCRILKYFIIAIYVLTILTSSVTLHVCF 64


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 159 VGL*VHVARYIYLSKFVCNEIYY 227
           +GL ++    I++  F+C+E +Y
Sbjct: 319 IGLTINAGLAIFILYFICDEAHY 341


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 261 PENTDSIEFFDYDKERIIPWT 323
           PE  D   F D +K +I+P T
Sbjct: 393 PEKFDPERFSDENKAKIVPGT 413


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 420 RNFPELEPVSSLP 458
           R  P+L P+SSLP
Sbjct: 474 RTSPQLSPMSSLP 486


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 261 PENTDSIEFFDYDKERIIPWT 323
           PE  D   F D +K+ + P+T
Sbjct: 406 PEKYDPERFSDENKKNLTPYT 426


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 224 LRYFCRLENVRLT*KHRLDRI 286
           LR+F +L N RL    RLD+I
Sbjct: 187 LRFFEKLGNRRLGFVQRLDQI 207


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 101 HLFLSCVYLPWY 136
           HLF+ CV+L  Y
Sbjct: 779 HLFVKCVFLMGY 790


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 224 LRYFCRLENVRLT*KHRLDRI 286
           LR+F +L N RL    RLD+I
Sbjct: 187 LRFFEKLGNRRLGFVQRLDQI 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,169
Number of Sequences: 336
Number of extensions: 2832
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)