Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0410
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 385 IYHRVGIATH*EDPARNSVGCVHGIIRSLS*SKNSIESVFS 263
           +Y R+G+    +  A N  G VHG  + +  S+ +I  + S
Sbjct: 224 LYIRIGLRIQSDSLAENVEGYVHGETKQVQ-SRKTITRMLS 263


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 189 IYLSKFVCNEIYYVIFADLKTSD*PEN 269
           +Y S      +YYV     +TSD  +N
Sbjct: 265 LYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 422 SNTSPSESSVLQNLPPGRNRDPLRRS-GEKLSGLCPWNNSLFVVIEEFDRVGVFR 261
           + T  ++ + L+  P   ++  +  S G+  S LCP   S  + +   +RVG  R
Sbjct: 348 TETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGINRVGSTR 402


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 189 IYLSKFVCNEIYYVIFADLKTSD*PEN 269
           +Y S      +YYV     +TSD  +N
Sbjct: 265 LYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 189 IYLSKFVCNEIYYVIFADLKTSD*PEN 269
           +Y S      +YYV     +TSD  +N
Sbjct: 265 LYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 390 AKSTTGSESRPTEKIRRETQ 331
           A  TTG+ + PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 434 LREISNTSPSESSVLQNLPPGRNRDPLRRSGEKLSGLCPWNN 309
           L     +S + S+ L  L    N+D  ++  E+++  CP NN
Sbjct: 303 LAGFETSSTTMSNALYEL--ALNQDVQKKLREEINTFCPKNN 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,375
Number of Sequences: 438
Number of extensions: 3266
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)