Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0406
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    27   0.43 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.43 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    27   0.43 
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   2.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.4  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   5.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   5.4  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    23   7.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.4  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 39  FVCSRNKILRRPSENTKRNGSSGYSKHSKELPWASWSG 152
           F C+ N+  +R +E         Y+  SK  PW  W+G
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 597


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 39  FVCSRNKILRRPSENTKRNGSSGYSKHSKELPWASWSG 152
           F C+ N+  +R +E         Y+  SK  PW  W+G
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 597


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 39  FVCSRNKILRRPSENTKRNGSSGYSKHSKELPWASWSG 152
           F C+ N+  +R +E         Y+  SK  PW  W+G
Sbjct: 446 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKGNPWPRWTG 483


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
 Frame = -2

Query: 189 DCNIPNIVNQHLVQT--NWP--KGALYYVCYSRCCHYVL 85
           D N+P++  +++     +WP   G +YY  ++ C  YVL
Sbjct: 186 DVNLPSLGIEYVSYCIEDWPIAYGRVYYSAFTLCVQYVL 224


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 598 PIKAINILKAHGRSARGKCTCQRLCSELH 684
           P +   IL   G      CT +RLC ELH
Sbjct: 181 PAQRTRILGLAGPLHGAGCTPERLCWELH 209


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 12  IKNVDYSRTFVCSRNKILRRPSENTKRN 95
           I+N+ +    +C+ N++ R  +E  ++N
Sbjct: 102 IRNIPFPAVTICNMNQLRREAAERIEQN 129


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 12  IKNVDYSRTFVCSRNKILRRPSENTKRN 95
           I+N+ +    +C+ N++ R  +E  ++N
Sbjct: 102 IRNIPFPAVTICNMNQLRREAAERIEQN 129


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 476 LIRDGLPSDSTVTVRLS*MYLTASLQARRYPEIMLVG 366
           ++R  LP+ S V V    ++  AS  A   P I +VG
Sbjct: 1   MLRKVLPTSSAVKVARKCVFRNASTAAPIRPRICIVG 37


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 33   RTFVCSRNKILRRPSENTKRNGS 101
            RT   SRN +LRR +  T   GS
Sbjct: 1400 RTLATSRNFLLRRGTSATPAGGS 1422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,835
Number of Sequences: 2352
Number of extensions: 14882
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)