Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0406
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 301 3e-82
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 301 3e-82
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 146 1e-35
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 146 1e-35
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 146 1e-35
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 145 2e-35
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 139 2e-33
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 139 2e-33
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 136 1e-32
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 129 2e-30
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 103 1e-22
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 103 1e-22
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 99 3e-21
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 51 9e-07
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 48 5e-06
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 29 3.2
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 29 3.2
Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 9.9
L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper) ch... 27 9.9
AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaper... 27 9.9
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 301 bits (739), Expect = 3e-82
Identities = 147/222 (66%), Positives = 177/222 (79%)
Frame = +1
Query: 40 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 219
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 220 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 399
LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GYRLA
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 400 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 579
CKEAVKYI +N++ T +S+GR S++N AKT+MSSK+IG DADFF E+VVDAA+A++ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN- 187
Query: 580 RGNTIYPIKAINILKAHGRSARGKCTCQRLCSELHCSITGNA 705
G YPI A+N+LKAHG+SAR + L+C++ A
Sbjct: 188 NGKVTYPINAVNVLKAHGKSARESVLVKGYA--LNCTVASQA 227
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 647 ESVLVKGYALNCTVASQAMP 706
ESVLVKGYALNCTVASQAMP
Sbjct: 210 ESVLVKGYALNCTVASQAMP 229
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 301 bits (739), Expect = 3e-82
Identities = 147/222 (66%), Positives = 177/222 (79%)
Frame = +1
Query: 40 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 219
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 220 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 399
LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GYRLA
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 400 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 579
CKEAVKYI +N++ T +S+GR S++N AKT+MSSK+IG DADFF E+VVDAA+A++ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN- 187
Query: 580 RGNTIYPIKAINILKAHGRSARGKCTCQRLCSELHCSITGNA 705
G YPI A+N+LKAHG+SAR + L+C++ A
Sbjct: 188 NGKVTYPINAVNVLKAHGKSARESVLVKGYA--LNCTVASQA 227
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 647 ESVLVKGYALNCTVASQAMP 706
ESVLVKGYALNCTVASQAMP
Sbjct: 210 ESVLVKGYALNCTVASQAMP 229
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 82/195 (42%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Frame = +1
Query: 67 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 234
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 235 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 414
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR A A
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQ 135
Query: 415 KYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTI 594
+ ++ + + +++ R L+ A+TT+ SK++ + F+++ VDA +K GN
Sbjct: 136 ESLKKSSIESGDNI-RDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLK---GSGN-- 189
Query: 595 YPIKAINILKAHGRS 639
+ AI I+K G S
Sbjct: 190 --LDAIQIIKKLGGS 202
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 82/195 (42%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Frame = +1
Query: 67 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 234
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 235 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 414
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR A A
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQ 135
Query: 415 KYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTI 594
+ ++ + + +++ R L+ A+TT+ SK++ + F+++ VDA +K GN
Sbjct: 136 ESLKKSSIESGDNI-RDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLK---GSGN-- 189
Query: 595 YPIKAINILKAHGRS 639
+ AI I+K G S
Sbjct: 190 --LDAIQIIKKLGGS 202
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 82/195 (42%), Positives = 125/195 (64%), Gaps = 4/195 (2%)
Frame = +1
Query: 67 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 234
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 235 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 414
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR A A
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQ 135
Query: 415 KYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTI 594
+ ++ + + +++ R L+ A+TT+ SK++ + F+++ VDA +K GN
Sbjct: 136 ESLKKSSIESGDNI-RDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLK---GSGN-- 189
Query: 595 YPIKAINILKAHGRS 639
+ AI I+K G S
Sbjct: 190 --LDAIQIIKKLGGS 202
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 145 bits (352), Expect = 2e-35
Identities = 70/164 (42%), Positives = 110/164 (67%)
Frame = +1
Query: 115 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 294
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 295 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLI 474
TT VV++A LL+ A++L+ IHP I G+ LACK+A++ + D+++ R L+
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLV 165
Query: 475 NTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIK 606
TA+T++ SK++ F+E+ VDA ++ + + IK
Sbjct: 166 ETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIK 209
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 145 bits (352), Expect = 2e-35
Identities = 70/164 (42%), Positives = 110/164 (67%)
Frame = +1
Query: 115 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 294
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 295 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLI 474
TT VV++A LL+ A++L+ IHP I G+ LACK+A++ + D+++ R L+
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLV 165
Query: 475 NTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIK 606
TA+T++ SK++ F+E+ VDA ++ + + IK
Sbjct: 166 ETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIK 209
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 145 bits (352), Expect = 2e-35
Identities = 70/164 (42%), Positives = 110/164 (67%)
Frame = +1
Query: 115 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 294
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 295 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLI 474
TT VV++A LL+ A++L+ IHP I G+ LACK+A++ + D+++ R L+
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLV 165
Query: 475 NTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIK 606
TA+T++ SK++ F+E+ VDA ++ + + IK
Sbjct: 166 ETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIK 209
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 139 bits (336), Expect = 2e-33
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Frame = +1
Query: 121 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 300
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 301 SVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD-NLTVTVESLGRPSLIN 477
SVV++AAE+LK ++ +HP +I AC++ +K + D + + E+ R L+
Sbjct: 96 SVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVK 155
Query: 478 TAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 579
A TT+SSKL+ + FF+ M+VDA + P
Sbjct: 156 CAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 139 bits (336), Expect = 2e-33
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Frame = +1
Query: 121 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 300
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 301 SVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD-NLTVTVESLGRPSLIN 477
SVV++AAE+LK ++ +HP +I AC++ +K + D + + E+ R L+
Sbjct: 96 SVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVK 155
Query: 478 TAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 579
A TT+SSKL+ + FF+ M+VDA + P
Sbjct: 156 CAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 136 bits (329), Expect = 1e-32
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Frame = +1
Query: 70 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 249
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 250 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 429
LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ A EA K I D
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK-ILD 148
Query: 430 NLTVTVESLGRPSLIN-TAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIK 606
++ V+ L +L+N A T+++SK++ + + M V+A + K +N ++ +K
Sbjct: 149 EMSSPVD-LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVK--KIINSENDSNVNLK 205
Query: 607 AINILKAHG 633
I I+K G
Sbjct: 206 MIKIIKKMG 214
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 136 bits (329), Expect = 1e-32
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Frame = +1
Query: 70 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 249
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 250 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 429
LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ A EA K I D
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK-ILD 148
Query: 430 NLTVTVESLGRPSLIN-TAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIK 606
++ V+ L +L+N A T+++SK++ + + M V+A + K +N ++ +K
Sbjct: 149 EMSSPVD-LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVK--KIINSENDSNVNLK 205
Query: 607 AINILKAHG 633
I I+K G
Sbjct: 206 MIKIIKKMG 214
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 129 bits (312), Expect = 2e-30
Identities = 61/176 (34%), Positives = 105/176 (59%)
Frame = +1
Query: 40 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 219
LS R G V+ N+ +++++SLGP + KML+D +G + +TNDG IL+
Sbjct: 12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILRE 71
Query: 220 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 399
+ V+HPAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II YR A
Sbjct: 72 ITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQA 131
Query: 400 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 567
++ +++ ++ + TV+ + K+ + +K+I D + + A + I+
Sbjct: 132 LEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIR 187
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 103 bits (247), Expect = 1e-22
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Frame = +1
Query: 88 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 267
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 268 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD-NLTVT 444
QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A + ++ ++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAP 142
Query: 445 VESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 567
VE R L+ +T + +KL AD +E VVDA AI+
Sbjct: 143 VE---RDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 103 bits (247), Expect = 1e-22
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Frame = +1
Query: 88 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 267
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 268 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD-NLTVT 444
QD+ GDGTTS V++ ELLK A+ LV +HP + G+ A + ++ ++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAP 142
Query: 445 VESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 567
VE R L+ +T + +KL AD +E VVDA AI+
Sbjct: 143 VE---RDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 99.1 bits (236), Expect = 3e-21
Identities = 56/189 (29%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Frame = +1
Query: 70 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 249
D +N+ + ++S+ GP G++KM+++ I + VTND ATILK LE++HPAA++
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARI 84
Query: 250 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 429
++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY A ++A++ +
Sbjct: 85 IIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILP- 143
Query: 430 NLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVD-AAQAIKTMNPRGNTIYPIK 606
T+ V+ I + + S + D +++ D A+A T P + + +
Sbjct: 144 --TLVVKEATDMKNIEEVRQYIRSAITSKQYD-NEDIIADLVAKACVTTCPANSFNFNVD 200
Query: 607 AINILKAHG 633
I I K G
Sbjct: 201 NIRICKIIG 209
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = +1
Query: 121 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 288
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 289 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV---KYIQDNLTVTVESLG 459
DGTT ++A + K E ++ + I G A + V K I +T T E +
Sbjct: 102 DGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVVAELKKISKKVT-TPEEIA 160
Query: 460 RPSLINTAKTTMSSKLI 510
+ + I+ T+ LI
Sbjct: 161 QVATISANGDTVVGNLI 177
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Frame = +1
Query: 121 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 288
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 289 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV---KYIQDNLTVTVESLG 459
DGTT ++ + K E ++ + I G A + V K I +T T E +
Sbjct: 102 DGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNAVEVVVAELKKISKKVT-TPEEIA 160
Query: 460 RPSLINTAKTTMSSKLI 510
+ + I+ T+ LI
Sbjct: 161 QVATISANGDTVVGNLI 177
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 235 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 414
P A +A +E+GDG V ++A+E+ N E+ KT++ S L KE
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSFRRAIGLRVKETK 147
Query: 415 KYIQDNLT 438
+ +T
Sbjct: 148 DVYEGEVT 155
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -2
Query: 207 CGTIVSDCNIPNIVNQHLVQTNWPKGALYYVCYSRCCHYVLCSHWVSAGSCSCY 46
CG V C+I IVN +L++ W G L Y+ S YVL G S Y
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVLFMGLTVMGQFSRY 120
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -2
Query: 207 CGTIVSDCNIPNIVNQHLVQTNWPKGALYYVCYSRCCHYVLCSHWVSAGSCSCY 46
CG V C+I IVN +L++ W G L Y+ S YVL G S Y
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVLFMGLTVMGQFSRY 120
>Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical
protein Y57G11C.14 protein.
Length = 242
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +1
Query: 340 DELVKTKIHPTSIISGYRLACKEAVKYIQDNLTV------TVESLGRPSLINTAKTTMSS 501
DE +K P II +L E++ + +L+ VES S+ N KTT SS
Sbjct: 82 DETLKNSSKPR-IIFNKQLGHAESIDFDVPSLSYESSDKGVVESTTSTSVSNPKKTTSSS 140
Query: 502 KLIGADADFFSEMVVDAAQAIKTMNPRGNTI 594
++A SE+ + K NP G +
Sbjct: 141 MFTKSEATTISELTTSTFK--KAKNPSGGAL 169
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 181 VTVTNDGATILKMLEVEHPAAKVLVELAQLQD 276
+T ++G+T+ K++ +EHPA ++ QD
Sbjct: 90 LTAHDEGSTLQKIISIEHPAIVQTFSVSHFQD 121
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 87 LCSHWVSAGSCSCYRQRCGYS 25
+C HW +GSCS Y C Y+
Sbjct: 74 ICDHWRRSGSCS-YGDACWYA 93
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 87 LCSHWVSAGSCSCYRQRCGYS 25
+C HW +GSCS Y C Y+
Sbjct: 41 ICDHWRRSGSCS-YGDACWYA 60
>L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper)
chaperonin protein 1 protein.
Length = 69
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 115 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 273
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
>AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaperone
protein.
Length = 69
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 115 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 273
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,356,494
Number of Sequences: 27780
Number of extensions: 349183
Number of successful extensions: 979
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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