Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0405
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p pro...    69   5e-12
AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA...    69   5e-12
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    32   0.84 
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    32   0.84 

>AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p
           protein.
          Length = 236

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 44/125 (35%), Positives = 56/125 (44%)
 Frame = +3

Query: 309 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 488
           PT  A+ NKWEGEDED+++                              +  K+      
Sbjct: 17  PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76

Query: 489 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 668
                      K    ++P +KLAEKLR QK+QE SDL+ A E FGVT    G LD F+P
Sbjct: 77  EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNP 130

Query: 669 TTKEE 683
            TKEE
Sbjct: 131 ETKEE 135


>AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA
           protein.
          Length = 236

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 44/125 (35%), Positives = 56/125 (44%)
 Frame = +3

Query: 309 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 488
           PT  A+ NKWEGEDED+++                              +  K+      
Sbjct: 17  PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76

Query: 489 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 668
                      K    ++P +KLAEKLR QK+QE SDL+ A E FGVT    G LD F+P
Sbjct: 77  EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNP 130

Query: 669 TTKEE 683
            TKEE
Sbjct: 131 ETKEE 135


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 510 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 620
           L+ +K  EE   E+KL EK RQ+KL+E E + +L  ET
Sbjct: 42  LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 79


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 510 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 620
           L+ +K  EE   E+KL EK RQ+KL+E E + +L  ET
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,286,377
Number of Sequences: 53049
Number of extensions: 475184
Number of successful extensions: 1684
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)