Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0404
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 489 e-138
SB_56| Best HMM Match : Actin (HMM E-Value=0) 488 e-138
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 487 e-138
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 485 e-137
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 362 e-100
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 328 4e-90
SB_54| Best HMM Match : Actin (HMM E-Value=0) 302 2e-82
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 9e-73
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 4e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 173 1e-43
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 124 1e-28
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 111 6e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 4e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 43 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.089
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.12
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 33 0.36
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.36
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.36
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 32 0.63
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.83
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.4
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.4
SB_30122| Best HMM Match : YadA (HMM E-Value=2) 30 1.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 30 1.9
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.9
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.5
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 30 2.5
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 29 3.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.3
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 29 3.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.4
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 4.4
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 5.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 5.8
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 5.8
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.8
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 7.7
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 7.7
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 7.7
SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2) 28 7.7
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 7.7
SB_21314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 489 bits (1205), Expect = e-138
Identities = 229/237 (96%), Positives = 234/237 (98%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 271
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 272 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 451
FETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 452 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 631
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELP 244
Query: 632 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
DGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNS MKCDVDIRKDLYANTVLS
Sbjct: 245 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 488 bits (1204), Expect = e-138
Identities = 229/237 (96%), Positives = 234/237 (98%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 271
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 272 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 451
FETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 124 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 452 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 631
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 243
Query: 632 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
DGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNS MKCDVDIRKDLYANTVLS
Sbjct: 244 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 300
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 487 bits (1202), Expect = e-138
Identities = 228/237 (96%), Positives = 234/237 (98%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 271
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 272 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 451
FETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGR
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGR 184
Query: 452 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 631
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELP 244
Query: 632 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
DGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNS MKCDVDIRKDLYANTVLS
Sbjct: 245 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 485 bits (1197), Expect = e-137
Identities = 228/237 (96%), Positives = 234/237 (98%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 271
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 272 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 451
FETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 124 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 452 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 631
DLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELP 243
Query: 632 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
DGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNS MKCDVDIRKDLYANTVLS
Sbjct: 244 DGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS 300
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 362 bits (891), Expect = e-100
Identities = 172/186 (92%), Positives = 180/186 (96%)
Frame = +2
Query: 245 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 424
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 425 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 604
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 605 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLY 784
SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNS MKCDVDIRKDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257
Query: 785 ANTVLS 802
ANTVLS
Sbjct: 258 ANTVLS 263
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTF 172
ILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 328 bits (805), Expect = 4e-90
Identities = 172/239 (71%), Positives = 188/239 (78%), Gaps = 2/239 (0%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 271
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 272 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLA 445
FETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+ R +
Sbjct: 125 FETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYSFTTTAEREIV- 183
Query: 446 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 625
RD+ + L + + E+E+ + A ++SS +EKSYE
Sbjct: 184 -RDIKEKLCYVALD--------FEQEM-----------------QTAASSSS--IEKSYE 215
Query: 626 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
LPDGQVITIGNERFRCPEAL QPSFLGME+ GIHETTYNS MKCDVDIRKDLYANTV+S
Sbjct: 216 LPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMS 274
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 302 bits (742), Expect = 2e-82
Identities = 137/217 (63%), Positives = 171/217 (78%)
Frame = +2
Query: 152 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 331
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 332 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 511
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 512 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 691
AE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQ
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQ 2308
Query: 692 PSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
PS LG + GIHE+ + S KCD+D+R +L+ N VLS
Sbjct: 2309 PSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLS 2345
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 270 bits (662), Expect = 9e-73
Identities = 120/238 (50%), Positives = 166/238 (69%), Gaps = 1/238 (0%)
Frame = +2
Query: 92 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 268
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 269 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 448
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 449 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 628
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L + Y L
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTL 246
Query: 629 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
PDG+V+ + ERF PEALFQP + +E G+ E +N+ D+D R + Y + VLS
Sbjct: 247 PDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLS 304
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 4e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +2
Query: 266 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 445
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 446 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 583
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 173 bits (421), Expect = 1e-43
Identities = 82/151 (54%), Positives = 112/151 (74%)
Frame = +2
Query: 200 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 379
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 380 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 559
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE---- 241
Query: 560 ALDFEQEMATAASSSSLEKSYELPDGQVITI 652
S S + Y LPDG +I +
Sbjct: 242 ------------SMESERQQYALPDGSIIEV 260
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 124 bits (298), Expect = 1e-28
Identities = 56/70 (80%), Positives = 62/70 (88%)
Frame = +2
Query: 593 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSFMKCDVDIR 772
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN MKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 773 KDLYANTVLS 802
KDLY+N VLS
Sbjct: 65 KDLYSNCVLS 74
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 111 bits (267), Expect = 6e-25
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 311 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 487
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 488 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 667
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 668 RCPEALFQPSFL 703
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +2
Query: 110 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 289
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 290 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 469
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 470 MKILTE 487
++ E
Sbjct: 123 RQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 278 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 454
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 455 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 586
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 644 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSFMKCDVDIRKDLYANTVLS 802
+ + ERF PE F P F + + E N C +D+R+ LY N VLS
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLS 249
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 104 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 217
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 347 TGIVLDSGDGVSHTVPI 397
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 43.2 bits (97), Expect = 3e-04
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 9/184 (4%)
Frame = +2
Query: 110 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 289
P + G + NWD ++IW +TF E + M +I+FE +N
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNF 331
Query: 290 PAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 451
A+ A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 332 KALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR------ 385
Query: 452 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSY 622
+ +L E +F ++ +KE CYV+ F ++M A +++ + Y
Sbjct: 386 -----QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREY 430
Query: 623 ELPD 634
LPD
Sbjct: 431 VLPD 434
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 155 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 334
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 335 SGRTTGIV 358
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.089
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 291 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 428
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 270 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 431
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.12
Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 11/187 (5%)
Frame = +3
Query: 276 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHS-------PTP 425
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S P+
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPSTPST 59
Query: 426 SCVWTWPVVXXXXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAA 605
C + P S S ++ ST S P P+
Sbjct: 60 PCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPST 119
Query: 606 PSR-SLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATWTSVRTC 782
PS S + P+ S+PS S P + ST ITP +T S +
Sbjct: 120 PSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPST--PITPGTPST-PSTPSA 176
Query: 783 TPTPYCP 803
TP P
Sbjct: 177 PGTPITP 183
Score = 32.7 bits (71), Expect = 0.36
Identities = 41/135 (30%), Positives = 52/135 (38%), Gaps = 3/135 (2%)
Frame = +3
Query: 300 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTPSCVWTWPVVXXXXXX 470
++PS PC+ T P P P + TP+T S TPC PST T S TP T P
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TPITPRT-PSTPCTHST 430
Query: 471 XXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSP 650
+T S ++ ST S P P+ PS T P+ S+P
Sbjct: 431 PGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPST--PSTPSTP 488
Query: 651 SETKDSVAQRLSSNP 695
S S S P
Sbjct: 489 STPSTSSTPSTPSTP 503
Score = 32.3 bits (70), Expect = 0.47
Identities = 49/179 (27%), Positives = 62/179 (34%), Gaps = 2/179 (1%)
Frame = +3
Query: 273 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVV 452
S ST +PS P + CT P P TP+T PST THS TPS T P
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPS----TPSTPITPSTPSTPCTHS-TPSAPST-PST 74
Query: 453 XXXXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSR-SLTNF 629
S S ++ ST S P P+ PS S +
Sbjct: 75 PSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPST 134
Query: 630 PTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATWTSVRTCT-PTPYCP 803
P+ S+PS S P + + T P + SA T + T TP P
Sbjct: 135 PSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGT-PSTPSTPSAPGTPITPSTLSTPSTP 192
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 279 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 392
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 294 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 392
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 291 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 428
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 32.7 bits (71), Expect = 0.36
Identities = 39/172 (22%), Positives = 60/172 (34%), Gaps = 1/172 (0%)
Frame = +3
Query: 279 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVX 455
H RPP S P +R T P P + PAT +PT +T + TP T P
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTP----TKPTTT 81
Query: 456 XXXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPT 635
T+ T+ + + PP P++ T P
Sbjct: 82 TPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPP-GTTTPTKPTTTTPP 140
Query: 636 VRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATWTSVRTCTPT 791
++P++ + ++ + A+T TP+ S T T T TPT
Sbjct: 141 ATTTPTKPTTTTPPATTTPTKPTTTTPPATT----TPTKSTTTTPPATTTPT 188
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 300 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 446
T+P+ P + T P P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 455 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 634
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 635 GQVITIGNERFRCP 676
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 294 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 419
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 270 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 392
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 294 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 392
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 546 SCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSV 671
SCA S S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 674 PEALFQPSFLGMEACGIHET 733
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 291 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 428
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 285 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 428
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 291 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 428
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 285 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 428
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 282 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 422
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 285 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPT 422
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 282 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRDTHSPTPS 428
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 291 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 386
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 253
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 242 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 358
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 447 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 268
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 267 IWVIFSLLALGLR 229
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 447 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 310
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 447 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 310
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 288 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 416
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 279 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 425
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_30122| Best HMM Match : YadA (HMM E-Value=2)
Length = 408
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +3
Query: 531 VTSRRSCATSLSTSSRRWPP-LHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNP---- 695
VT + + T LS SRR P + A S + T+ ++ SS SE S S++P
Sbjct: 84 VTIKPTVKTVLSEPSRRSPEDIMAEARSENQTHTRSLSSSSSENSLSFKVTKSTSPITVT 143
Query: 696 -RSWVWKLAA--STRPHITPS*SATWTSVRTCT 785
+ W +A RP +T S + ++V TCT
Sbjct: 144 KATPAWSSSAWKPNRPPVTQSIGMSTSAVTTCT 176
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 226 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 318
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.3 bits (65), Expect = 1.9
Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 4/179 (2%)
Frame = +3
Query: 270 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTRDTHSPTPSCVWT-- 440
C+ T P +P+ + T P + +TP T +PTP + +++PTPS T
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPSYTSTTS 97
Query: 441 -WPVVXXXXXXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRS 617
P S+ ++ T+ T + + + S
Sbjct: 98 YTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTS 157
Query: 618 LTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATWTSVRTCTPTP 794
T+ + S+PS T + +S + + S + + + ++TS + TPTP
Sbjct: 158 YTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTPTP 216
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 306 PSKPCSRCTRPVVPP 350
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 552 ATSLSTSSRRWPPLH-PAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 704
AT+L T + W P H P +++L P S PS A L + P+ W
Sbjct: 242 ATTLGTKPQPWGPSHNPGDQAKTLGTKPQ-PSGPSHNPRDQATTLGTKPKPW 292
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 294 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 392
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 294 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 398
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = -2
Query: 580 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGVGECVS- 404
+++ V V ++L V + G G + + + +D V + G+V GVG+
Sbjct: 15 MVVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADG 72
Query: 403 -LVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 293
+ D GVGD G D GG GRV + G+ D G
Sbjct: 73 RVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = -2
Query: 535 VTNDFPLGGGSE-RVAALGEDLHEVVCEVTTGQVQTQDGVGECVSLVDGHGVGDTVAGVQ 359
V++D +G +E RV+ G + + V+ DGVG + D GVGD G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 358 HDTGG----TTGRVQREHGLDGDVHGGRV 284
D GG GRV + G+ GD GRV
Sbjct: 145 SDDGGVGDDAEGRVSDDGGV-GDDGVGRV 172
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 580 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGV 419
L+LEV+ + + L D+ ND+PL G V+ +D+ C+ + Q G+
Sbjct: 34 LILEVDLEYPKSLYDLHNDYPLAAGKVNVS---KDMLSEYCDKIATKYGIQTGL 84
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 291 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 425
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 546 SCATSLSTSSRRWPPL---HPAAPSRSLTN 626
SC ++LS SR W +PAAP+RS+T+
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 291
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +3
Query: 549 CATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAAST 728
CA ++S+ + LH S S ++ PT+ + S T+DSV +S+ + V K+ T
Sbjct: 779 CAENISSDQQESMALHTKPKSLSSSDLPTMVVTHSATRDSVT--VSTPILANVSKVGTGT 836
Query: 729 RPHITPS*SATWTSVRTCTPTPYCP 803
H P T S+ +P + P
Sbjct: 837 --HNKPKSCETGESMTAMSPGIHMP 859
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 546 SCATSLSTSSRRWPPL---HPAAPSRSLTN 626
SC ++LS SR W +PAAP+RS+T+
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 405
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 300 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 404
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 580 LLLEVESDVAQLLLDVTN---DFPLGGGSERVAALGEDLHEVVCEVTTGQVQT 431
+LL+ ES+ A +LLD DF G ER+AA E + ++ ++ +QT
Sbjct: 354 VLLDEESEKANMLLDFYTHYKDFRKTAGEERLAAPLEFIRDLPSKILEAYIQT 406
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 642 SSPSETKDSVAQRLSSNPRSWVWK 713
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 205 PRPAY*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 351
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 327 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 428
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 265 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 411
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 230 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 358
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 300 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 437
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 525 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSS--PSETKDSVAQRLSSNPR 698
S V+S + +++ST R P+ AA SR+++ T + P ETK + + S+PR
Sbjct: 868 STVSSVETTPSTVSTKPRTIFPV--AASSRTISPVETTPETIPPVETKSTTISAIESSPR 925
Query: 699 SWVWKLAASTRPHITPS*SATWTSVRTCTPTP 794
+ T P TP T + + TP
Sbjct: 926 T---ASTVETTPWTTPPVKTTTGTRSSIETTP 954
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 330 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 446
T VVPP+ P V P+P + SPTPSC+ P
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQP 240
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 539 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 679
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 306 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 449
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 276 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 425
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +1
Query: 223 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 402
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 403 GIRTPPRHPASGLGRS*PHRLPH 471
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 235 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 414
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 415 PPRHP 429
P HP
Sbjct: 248 APDHP 252
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 303 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 425
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 381 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 208
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 207 G 205
G
Sbjct: 147 G 147
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 564 STSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNP 695
S+++R PP P P++ PT + S++ A L NP
Sbjct: 799 SSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGENP 842
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 337 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLGRS*PHRLPHE 474
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 259 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 426
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 300 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 440
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_25401| Best HMM Match : DUF669 (HMM E-Value=3.2)
Length = 226
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = +3
Query: 519 GKSFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPR 698
GK+ ++R+S ++ TSS P PA+P +LT T+ PS ++D V L S P
Sbjct: 29 GKA-TSTRKSDHSTYKTSSSFKP---PASPVLTLT---TLSRQPSVSED-VDSNLPSPPP 80
Query: 699 SWVWKLAASTRPHITP 746
S VWK+ P P
Sbjct: 81 S-VWKVPEYVEPKWNP 95
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 288 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 425
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_21314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 768 MSTSHFMKELYVVSWMPQASIPKNEGWKRASGQ 670
M S+ +K + VS AS PKNE W++ G+
Sbjct: 103 MKASYGIKAVEEVSSSGSASFPKNEDWEKEFGK 135
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 71 IRHEXIXILTLKYPIEHG---IVTNWDDME--KIWHHTFYNELRVAPEEHPVLLTEAPLN 235
+R+ + + T P+ + + T ++ + K+ T YN L V +PV + +
Sbjct: 49 VRYTQLMVFTRYNPVRYAQLIVFTRYNPVRYAKLMVFTRYNPLMVFTRYNPVRYAQLLVF 108
Query: 236 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 361
+ N + TQ+M T P Y + V + Y R T +++
Sbjct: 109 TRYNPVRYTQLMVFTRYNPVRYTQLM-VFTRYNHVRYTQLMV 149
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 428
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,188,761
Number of Sequences: 59808
Number of extensions: 697431
Number of successful extensions: 5327
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 4622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5248
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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