Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0401
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    28   0.23 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   0.93 
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    25   2.2  
AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative odorant-b...    25   2.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.6  
DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.        23   8.7  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        23   8.7  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        23   8.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.7  

>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 384 YPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPI 488
           Y    +P + RK  +K    VK+R P GPP + P+
Sbjct: 37  YEDGYKPQEQRKLAMK----VKRRLPGGPPSVCPV 67


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 382 YTRRELIWYISVCTTGTTCTSPDSPGGHGTLVSPSPP 272
           Y  + L+ Y  +    TT T  D  GG     +PSPP
Sbjct: 42  YHLKRLVTYSKLKRAATTATIVDGRGGDYADSAPSPP 78


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 169 KFTMMPQSYSYFSVFTLTSLPGCKKGFK 86
           K TM+P   + + +F + S   C+ G+K
Sbjct: 69  KTTMLPNLTANYGIFQINSKEWCRVGYK 96


>AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative
           odorant-binding protein OBPjj9 protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 30  TQLDLLGDQFRSFITKPEYLKPFLQPG 110
           T  D +    RSFI +PEYL    Q G
Sbjct: 65  TMQDAIAQCNRSFIIQPEYLAELNQTG 91


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +3

Query: 171 RHKSNKGKKGQE-ENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVH 347
           R   +KG  G E E P+T  PA  V  +L  +    GDG T     P  S   ++V    
Sbjct: 62  RENGDKGSTGSEAERPVT-PPAQRVQFILGGEVGGEGDG-TQHESHPLFSEMEELVKEGD 119

Query: 348 TLIYQISSLRVYYPKDLRPSDNRKS 422
            + ++ ++  V + +D+    NR S
Sbjct: 120 EMAWKETARWVKFEEDVEEGGNRWS 144


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 573  IHTDKNRSALTAA-YDKKQELYEELQNAKAE 662
            IHT + R  L +A  DK +++ EEL+    E
Sbjct: 916  IHTTEKRIRLVSATQDKLEDVVEELEGKNRE 946


>DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 224 GRQRILFLSFLAFVRFMSEVHYDAPVVFVFLCFHLDKSSR 105
           GR+  L    L       E HY  P+VF+    H+ +  R
Sbjct: 17  GRREKLSKQRLENAHSEDEEHYRKPMVFLDQLLHMQRGGR 56


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 315 SGDVQVVPVVHTLIY 359
           S D QV PV+H L Y
Sbjct: 36  SDDCQVTPVIHVLQY 50


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 315 SGDVQVVPVVHTLIY 359
           S D QV PV+H L Y
Sbjct: 36  SDDCQVTPVIHVLQY 50


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 273 GGDGETNVPCPPGESGDV 326
           G  G+   P PPG  GDV
Sbjct: 140 GEKGDLGTPGPPGYPGDV 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,181
Number of Sequences: 2352
Number of extensions: 13261
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)