Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0401
(668 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df pro... 246 3e-65
AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA... 246 3e-65
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro... 34 0.20
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA... 34 0.20
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 4.3
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 4.3
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 4.3
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 4.3
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 4.3
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 4.3
X12836-1|CAA31321.1| 463|Drosophila melanogaster K10 protein pr... 29 5.7
BT022713-1|AAY55129.1| 135|Drosophila melanogaster RE62510p pro... 29 5.7
AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p pro... 29 5.7
AL009195-3|CAA15702.1| 463|Drosophila melanogaster EG:30B8.5,FB... 29 5.7
AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA ... 29 5.7
AE013599-3438|AAF46881.2| 135|Drosophila melanogaster CG13512-P... 29 5.7
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 28 10.0
AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA... 28 10.0
>AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df protein.
Length = 1055
Score = 246 bits (601), Expect = 3e-65
Identities = 120/222 (54%), Positives = 154/222 (69%)
Frame = +3
Query: 3 SVASYSTIRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDWGIIVNFRHKS 182
++ASY IR+QLD G QFR +ITKP+YL PFLQPGRLVKV EYDWGI++NF+ K
Sbjct: 638 NIASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFK-KQ 696
Query: 183 NKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQ 362
++ +K NPL AEP++ +D+LLHV A G+T PC P E G ++VVPV HTLI Q
Sbjct: 697 DQSRK----NPLKAEPSVTIDVLLHVSEAAAKTGDTE-PCKPNERGCMEVVPVAHTLITQ 751
Query: 363 ISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQCVDRIK 542
ISS+RVY+P DLR +DNR++VLKTI E KKRFP GPP+LNPI+DM I D F+ V+ I
Sbjct: 752 ISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTIS 811
Query: 543 LLEERLYSHPIHTDKNRSALTAAYDKKQELYEELQNAKAELE 668
E+RL HP+H + Y K L ++LQ+ KAEL+
Sbjct: 812 QFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQDLKAELK 853
>AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA
protein.
Length = 1055
Score = 246 bits (601), Expect = 3e-65
Identities = 120/222 (54%), Positives = 154/222 (69%)
Frame = +3
Query: 3 SVASYSTIRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDWGIIVNFRHKS 182
++ASY IR+QLD G QFR +ITKP+YL PFLQPGRLVKV EYDWGI++NF+ K
Sbjct: 638 NIASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFK-KQ 696
Query: 183 NKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQ 362
++ +K NPL AEP++ +D+LLHV A G+T PC P E G ++VVPV HTLI Q
Sbjct: 697 DQSRK----NPLKAEPSVTIDVLLHVSEAAAKTGDTE-PCKPNERGCMEVVPVAHTLITQ 751
Query: 363 ISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQCVDRIK 542
ISS+RVY+P DLR +DNR++VLKTI E KKRFP GPP+LNPI+DM I D F+ V+ I
Sbjct: 752 ISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTIS 811
Query: 543 LLEERLYSHPIHTDKNRSALTAAYDKKQELYEELQNAKAELE 668
E+RL HP+H + Y K L ++LQ+ KAEL+
Sbjct: 812 QFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQDLKAELK 853
>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
Length = 2486
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = -2
Query: 445 TSPIVFNTDFRLSEGLKSLG*YTRRELIWYISVCTTGTTCTSPDSPGGHGTLVSPSPPVA 266
T V ++ + GL +L Y+ + +W S T +P +P P+PP++
Sbjct: 1575 TGTPVLSSSSSMPPGLGNLSSYSSKAALWLNSPANAVVTTCAPTTPIVSSGSARPTPPLS 1634
Query: 265 VFTCSRMSTIMAGSAVKGFSSC 200
C+ M M +A SSC
Sbjct: 1635 --NCTSMGIGMVNAASTARSSC 1654
>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
protein.
Length = 2486
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = -2
Query: 445 TSPIVFNTDFRLSEGLKSLG*YTRRELIWYISVCTTGTTCTSPDSPGGHGTLVSPSPPVA 266
T V ++ + GL +L Y+ + +W S T +P +P P+PP++
Sbjct: 1575 TGTPVLSSSSSMPPGLGNLSSYSSKAALWLNSPANAVVTTCAPTTPIVSSGSARPTPPLS 1634
Query: 265 VFTCSRMSTIMAGSAVKGFSSC 200
C+ M M +A SSC
Sbjct: 1635 --NCTSMGIGMVNAASTARSSC 1654
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 177 KSNKGKKGQEENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESG 320
K +KG G+ + +I + K G G+T +P PPGE G
Sbjct: 733 KGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEDG 780
>X12836-1|CAA31321.1| 463|Drosophila melanogaster K10 protein
protein.
Length = 463
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 459 PDGPPLLNPINDMKINDSVFKQCV---DRIKLLEERLYSHPIHTDKNRSALTAAYDKKQE 629
P GP +N MK N + KQ V IK L+ + +PI + + +DKK +
Sbjct: 327 PYGPMNMNGGRIMKPNPKLIKQVVKGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVD 386
Query: 630 LYEELQNAK 656
+ L+ K
Sbjct: 387 IENRLKGHK 395
>BT022713-1|AAY55129.1| 135|Drosophila melanogaster RE62510p
protein.
Length = 135
Score = 29.1 bits (62), Expect = 5.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 53 PVSVVHN*AGVLEAFFATGKTCQGENREIRIRLGHH 160
PVSV+H+ VL G C N IR+R+ HH
Sbjct: 53 PVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHH 88
>AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p
protein.
Length = 463
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 459 PDGPPLLNPINDMKINDSVFKQCV---DRIKLLEERLYSHPIHTDKNRSALTAAYDKKQE 629
P GP +N MK N + KQ V IK L+ + +PI + + +DKK +
Sbjct: 327 PYGPMNMNGGRIMKPNPKLIKQVVKGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVD 386
Query: 630 LYEELQNAK 656
+ L+ K
Sbjct: 387 IENRLKGHK 395
>AL009195-3|CAA15702.1| 463|Drosophila melanogaster
EG:30B8.5,FBgn0000810;fs(1)K10 protein.
Length = 463
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 459 PDGPPLLNPINDMKINDSVFKQCV---DRIKLLEERLYSHPIHTDKNRSALTAAYDKKQE 629
P GP +N MK N + KQ V IK L+ + +PI + + +DKK +
Sbjct: 327 PYGPMNMNGGRIMKPNPKLIKQVVKGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVD 386
Query: 630 LYEELQNAK 656
+ L+ K
Sbjct: 387 IENRLKGHK 395
>AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA
protein.
Length = 463
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 459 PDGPPLLNPINDMKINDSVFKQCV---DRIKLLEERLYSHPIHTDKNRSALTAAYDKKQE 629
P GP +N MK N + KQ V IK L+ + +PI + + +DKK +
Sbjct: 327 PYGPMNMNGGRIMKPNPKLIKQVVKGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVD 386
Query: 630 LYEELQNAK 656
+ L+ K
Sbjct: 387 IENRLKGHK 395
>AE013599-3438|AAF46881.2| 135|Drosophila melanogaster CG13512-PA
protein.
Length = 135
Score = 29.1 bits (62), Expect = 5.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 53 PVSVVHN*AGVLEAFFATGKTCQGENREIRIRLGHH 160
PVSV+H+ VL G C N IR+R+ HH
Sbjct: 53 PVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHH 88
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 28.3 bits (60), Expect = 10.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 367 LIWYISVCTTGTTCTSPDSPGGHGTLVSPSPPVAVFTCSRMSTIMAGSAVKGFSS 203
+ W + ++G+ S GGH +PSP V V S+++ G+A SS
Sbjct: 817 ICWRANKESSGSGSGSGSHGGGHHVASTPSPMVMVAGTGSASSVLQGAADTNDSS 871
>AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA
protein.
Length = 1316
Score = 28.3 bits (60), Expect = 10.0
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +3
Query: 321 DVQVVPVVHTLIYQISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMK 500
D V V H Q SS+ + + D + V + GE K F GPPL + + K
Sbjct: 594 DANEVQVKHAF-RQDSSVIIQWDSDTANILGFRVVYRLFGE--KAFKQGPPLESSEREFK 650
Query: 501 INDSVFKQCVDRIKLLEERLYSHP 572
I + ++C+ + E L+ P
Sbjct: 651 IKNVPAQECIIVCVISLEELHVTP 674
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,969,985
Number of Sequences: 53049
Number of extensions: 625140
Number of successful extensions: 2248
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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