Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0401
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 85 4e-17
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 30 1.3
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 30 1.3
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 30 1.3
AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical ... 30 1.7
Z83220-1|CAB05700.2| 440|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 28 5.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 5.2
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 28 5.2
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 28 5.2
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 28 5.2
Z95559-6|CAB63363.1| 187|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81056-10|CAB02904.2| 301|Caenorhabditis elegans Hypothetical p... 28 6.9
Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 28 6.9
U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical pr... 27 9.1
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 27 9.1
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical protein
W08D2.7 protein.
Length = 1026
Score = 85.0 bits (201), Expect = 4e-17
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Frame = +3
Query: 24 IRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDWGIIVNFRHKSNKGKKGQ 203
++ QL+ + +P+Y+ FL GRL KVK+ ++ WGI+ F+ + N +
Sbjct: 616 LQDQLEATRQRIIQIQREPKYIVGFLHAGRLFKVKSGDRDFKWGILNQFKKEQNPDDRND 675
Query: 204 EENPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQV---VPVVHTLIYQISSL 374
+ + D+++ + T D PG + VP+ I IS++
Sbjct: 676 Q--------IYLCDMMIAINTEGRFDPTNPATLVPGFDLPKRRWIRVPMTIDRITAISAV 727
Query: 375 RVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQCVDRIKLLEE 554
R+ P D+ D + + + KRF + PLL+PI DM+I K+ + R K LE
Sbjct: 728 RLKVPADIDKPDGQMRLDGMMAAATKRFGNQIPLLDPIQDMEIKTVEMKELIAREKSLEG 787
Query: 555 RLYSHPIHTDKNRSALTAAYDKKQELYEELQNAKAE 662
RL +H + N L +++KQ+ +EL KAE
Sbjct: 788 RLETHSMTKRDNMKDLKKQFEQKQDAVKELNALKAE 823
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 334 TTCTSPDSPGGHGT--LVSPSPPVAVFTCSRMSTIMAGSAVKGFSSCPFLP 188
T+ S D P G T +V+PSP V + S S M S+ GF++ P P
Sbjct: 154 TSSGSTDEPSGQSTPAIVTPSPKFNVPSLSVTSAKMIQSSSMGFATTPKSP 204
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 334 TTCTSPDSPGGHGT--LVSPSPPVAVFTCSRMSTIMAGSAVKGFSSCPFLP 188
T+ S D P G T +V+PSP V + S S M S+ GF++ P P
Sbjct: 154 TSSGSTDEPSGQSTPAIVTPSPKFNVPSLSVTSAKMIQSSSMGFATTPKSP 204
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 334 TTCTSPDSPGGHGT--LVSPSPPVAVFTCSRMSTIMAGSAVKGFSSCPFLP 188
T+ S D P G T +V+PSP V + S S M S+ GF++ P P
Sbjct: 154 TSSGSTDEPSGQSTPAIVTPSPKFNVPSLSVTSAKMIQSSSMGFATTPKSP 204
>AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical
protein H37A05.1 protein.
Length = 823
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 405 SDNRKSVLKTIGEVKKRFPDGPPLLNP 485
S K LK++ + K+ PDGP LL+P
Sbjct: 611 SHTTKQYLKSVAQDSKQLPDGPVLLSP 637
>Z83220-1|CAB05700.2| 440|Caenorhabditis elegans Hypothetical
protein C34B7.1 protein.
Length = 440
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 379 TRRELIWYISVCTTGTTCTSPDSPGGHGTL--VSPSPPVAVFTCSRMST 239
T R+ +Y+++CTT C + TL V+P+P + TC ST
Sbjct: 85 TTRQGQYYVALCTTQDMCNNDCKTQTQPTLPPVNPTPLLGSVTCYECST 133
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
F10F2.2 protein.
Length = 1343
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 24 IRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDW 152
+R + +L+GD+ F T P+ LK + R + K ++DW
Sbjct: 1012 LREEWELVGDRLGEFQTNPKSLKEAREVRRTCQKINYKCDFDW 1054
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +3
Query: 210 NPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQISSLRVYYP 389
NP + EP +VD + GG TN P G+S + + V IY SS RV YP
Sbjct: 446 NPGSFEPPEMVDASWN---KNGGILSTNGPVVIGKS-EPRAQLTVDGDIY--SSGRVMYP 499
Query: 390 KDLRPSDN 413
D+R DN
Sbjct: 500 SDIRLKDN 507
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/93 (26%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Frame = -2
Query: 361 WYISVCTTGTTCTSPDS---PGGHGTLVSPSPPVAVFTCSRMSTIMAGSAVKGFSSCPFL 191
W + T SP P G + PSP F C + F P L
Sbjct: 5 WLLVAALLAFTQASPPMCHCPNGQVGMQCPSP--INFNCPPQAPCPPQQGCNMFGGLPTL 62
Query: 190 PLFDLCLKFTMMPQSYSYFSVFTLTSLPGCKKG 92
P T+ PQ + + FTL LPG G
Sbjct: 63 P--------TLAPQQFQTLAPFTLAPLPGSPPG 87
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +3
Query: 210 NPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQISSLRVYYP 389
NP + EP +VD + GG TN P G+S + + V IY SS RV YP
Sbjct: 446 NPGSFEPPEMVDASWN---KNGGILSTNGPVVIGKS-EPRAQLTVDGDIY--SSGRVMYP 499
Query: 390 KDLRPSDN 413
D+R DN
Sbjct: 500 SDIRLKDN 507
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +3
Query: 210 NPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQISSLRVYYP 389
NP + EP +VD + GG TN P G+S + + V IY SS RV YP
Sbjct: 444 NPGSFEPPEMVDASWN---KNGGILSTNGPVVIGKS-EPRAQLTVDGDIY--SSGRVMYP 497
Query: 390 KDLRPSDN 413
D+R DN
Sbjct: 498 SDIRLKDN 505
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +3
Query: 210 NPLTAEPAIIVDILLHVKTATGGDGETNVPCPPGESGDVQVVPVVHTLIYQISSLRVYYP 389
NP + EP +VD + GG TN P G+S + + V IY SS RV YP
Sbjct: 395 NPGSFEPPEMVDASWN---KNGGILSTNGPVVIGKS-EPRAQLTVDGDIY--SSGRVMYP 448
Query: 390 KDLRPSDN 413
D+R DN
Sbjct: 449 SDIRLKDN 456
>Z95559-6|CAB63363.1| 187|Caenorhabditis elegans Hypothetical
protein Y41E3.13 protein.
Length = 187
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 411 NRKSVLKTIGEVKKRFPDGPPLLNPI 488
N+ L+ IG + K PD PPL+ I
Sbjct: 86 NKAETLEEIGALNKNLPDVPPLIKTI 111
>Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical
protein R06B9.1 protein.
Length = 423
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 285 ETNVPCPPGESGDVQVVPVVHTLIYQISSLRVYYPKDLRPSDNRK 419
+ NVPCP G SG V+P YQ S V +LR +N K
Sbjct: 358 DVNVPCPSGGSG-TAVIPSAPPPSYQESMYGV-GGTELRAEENEK 400
>Z81056-10|CAB02904.2| 301|Caenorhabditis elegans Hypothetical
protein F09F3.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 526 HCLNTESLIFISLMGFN 476
HCL T L F+SL+GF+
Sbjct: 4 HCLETAVLFFVSLLGFS 20
>Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical
protein R07E3.3 protein.
Length = 379
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 215 RILFLSFLAFVRFMSEVHYDAPVVFVFLCFHLDKSSRLQKRLQV 84
R LFLS V F E VF CF+++ R+QK +Q+
Sbjct: 95 RGLFLSTNVVVAFNPEFLTKNDRVFKVQCFYMEMERRIQKVIQI 138
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 441 EVKKRFPDGPPLLNPINDMKINDSVFKQCVDRIKLLEERLYSHPIHTDKNRSALT--AAY 614
E+ PD +++ N K + K ++ + LEE+L H + R +
Sbjct: 260 EIMAEIPDFEEIIDLFNQFKSSMESQKDILNTLAGLEEQLGDHQLEIKSVRKDINKLKGL 319
Query: 615 DKKQELY-EELQNAKAELE 668
KQ Y EEL+ K+ LE
Sbjct: 320 QGKQSFYKEELKLKKSALE 338
>U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical
protein F45F2.11 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 321 DVQVVPVVHTLIYQISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMK 500
D Q +P H I I +L + DL + +L+ ++ R+P+ PP + P D++
Sbjct: 69 DFQPLPPPHIYIEMIRTLAPHQYIDLTYALAGSVLLEMGVKIPDRYPNLPPKIEPYRDIE 128
Query: 501 INDS 512
++
Sbjct: 129 SEEA 132
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +3
Query: 414 RKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQCVDRIKLLEE----RLYSHPIHT 581
R SVLK E+KKR + + N + + D F KL +E R Y +
Sbjct: 86 RNSVLKENQELKKRLAEAESVPNSLATSRNGDCSFHVAELEQKLRKEMSLTRKYEQRLQQ 145
Query: 582 DKNRSALTAAYDKKQELYEELQNAKAE 662
+++ +A D K EL + A+ E
Sbjct: 146 LESQLKNNSASDSKMELANKQLEAERE 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,734,828
Number of Sequences: 27780
Number of extensions: 319379
Number of successful extensions: 1330
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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