Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0401
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 29 0.040
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 4.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.6
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 6.1
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 6.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.1
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 6.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.1
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 6.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.1
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 22 6.1
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 6.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 6.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 8.0
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 29.1 bits (62), Expect = 0.040
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 370 ELIWYISVCTTGTTCTSPDSPGGHGTLVSPSPPVAVFT 257
EL W+ + T TSP PGG + SPS P + F+
Sbjct: 65 ELGWF-NDSAAAITSTSPSYPGGGSSSPSPSSPSSFFS 101
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 307 GGHGTLVSPSPPVAV 263
GGHG L++P VAV
Sbjct: 1932 GGHGGLLTPYDTVAV 1946
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 352 SVCTTGTTCTSPDSPGGHGTLVSPSPPVAV 263
S+CT+ TT + H L+SP AV
Sbjct: 632 SMCTSTTTSPDKEHVLAHNDLMSPLDEPAV 661
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 317 WRRTSGSSRTHTNIPDQFSSGVLS*GL 397
++ T RTH PD S+G GL
Sbjct: 52 FKHTDACCRTHDMCPDVMSAGESKHGL 78
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 317 WRRTSGSSRTHTNIPDQFSSGVLS*GL 397
++ T RTH PD S+G GL
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 486 INDMKINDSVFKQCVDRIKLLEE 554
IN+ + ND + QC D+ +EE
Sbjct: 55 INESEFNDENYWQCNDKKTDIEE 77
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 203 LSFLAFVRFMSEVHYDAP 150
L + +R++ E+H DAP
Sbjct: 321 LMLTSILRYLQELHVDAP 338
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 431 DYRRGEKEVPRWSPAV 478
+YR GE P ++PAV
Sbjct: 575 EYRNGEVTTPLFTPAV 590
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 496 ISLMGFNSGGPSGNLFFTSPI 434
I+L+G ++GG S + + SP+
Sbjct: 203 ITLIGLSAGGASVHYHYLSPL 223
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.1
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 9 ASYSTIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRH 176
++ +T+ + D++ + I + E KP + + V T+ E+D ++VN +
Sbjct: 132 STITTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKK 191
Query: 177 KSNKGKK 197
N+ KK
Sbjct: 192 SGNESKK 198
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.1
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 9 ASYSTIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRH 176
++ +T+ + D++ + I + E KP + + V T+ E+D ++VN +
Sbjct: 143 STITTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKK 202
Query: 177 KSNKGKK 197
N+ KK
Sbjct: 203 SGNESKK 209
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 496 ISLMGFNSGGPSGNLFFTSPI 434
I+L+G ++GG S + + SP+
Sbjct: 74 ITLIGLSAGGASVHYHYLSPL 94
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 317 WRRTSGSSRTHTNIPDQFSSGVLS*GL 397
++ T RTH PD S+G GL
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 496 ISLMGFNSGGPSGNLFFTSPI 434
I+L+G ++GG S + + SP+
Sbjct: 203 ITLIGLSAGGASVHYHYLSPL 223
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPLFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 135 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 194
Query: 186 KGKK 197
+ KK
Sbjct: 195 ESKK 198
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 STIRTQLDLLGDQFRSFITKP-EYLKPFLQPGRLVKVKTEKY---EYDWGIIVNFRHKSN 185
+T+ + D++ + I + E KP + + V T+ E+D ++VN + N
Sbjct: 146 TTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVNIKKSGN 205
Query: 186 KGKK 197
+ KK
Sbjct: 206 ESKK 209
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,313
Number of Sequences: 438
Number of extensions: 3748
Number of successful extensions: 32
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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