Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0398
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 47  ATLKNHRLRRKSDR 6
           ATLK+H+L   SD+
Sbjct: 559 ATLKDHKLAEASDK 572


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 241 DADGNGTIDFPEFLTMMARKMKDTD 315
           DADG G  + PE +       KD D
Sbjct: 204 DADGTGNCEDPEDVPGCEDYYKDVD 228


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 426  SEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 328
            S+ + + G+DV  L +  + VAV+  D  G  D
Sbjct: 1565 SKTVIDAGYDVPVLAQNLDWVAVMTYDFHGQWD 1597


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 318 AIRVLHLARHHCQELGKVYR 259
           AI+     RH  Q+L +VYR
Sbjct: 601 AIKTSPKMRHELQKLAQVYR 620


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,275
Number of Sequences: 336
Number of extensions: 2303
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)