Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0393
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.4  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 266 FNFMLNNFERHQVGCDENTSSLDVW 192
           +NF+ +NF+RH    +EN + L ++
Sbjct: 402 YNFLNHNFDRHY---EENRAPLGLY 423


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/40 (17%), Positives = 18/40 (45%)
 Frame = +2

Query: 98  NYYFSSIPLSHVTAFRALNIISFVMCNSLLSSTHLSWTYS 217
           +Y+F  +  SH+ +    NI+  ++   +       W ++
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/40 (17%), Positives = 18/40 (45%)
 Frame = +2

Query: 98  NYYFSSIPLSHVTAFRALNIISFVMCNSLLSSTHLSWTYS 217
           +Y+F  +  SH+ +    NI+  ++   +       W ++
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 70  LETVCYIVPKLLLFQYPFVT 129
           L+TV + VP++L++   F+T
Sbjct: 216 LQTVFFTVPRVLMYFDIFIT 235


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/40 (17%), Positives = 18/40 (45%)
 Frame = +2

Query: 98  NYYFSSIPLSHVTAFRALNIISFVMCNSLLSSTHLSWTYS 217
           +Y+F  +  SH+ +    NI+  ++   +       W ++
Sbjct: 191 DYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 541 AKLDILHAHSTSVI 500
           AKL++LH H T  +
Sbjct: 245 AKLNVLHLHLTDAV 258


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 615 FKEELVIMFSYYI*MVPNF 671
           FKE  +  F+YY+ +V  F
Sbjct: 70  FKEASLYCFNYYVIVVTTF 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,284
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)