Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0392
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.8  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    24   6.7  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    23   8.9  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   8.9  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   8.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/46 (19%), Positives = 25/46 (54%)
 Frame = +1

Query: 151 TALQKMVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIG 288
           T    ++G++   ++     + D+Q+ LW    ++R++  + +I+G
Sbjct: 543 TTFSNIIGSSGPSVTSCTGSEIDKQVGLW----ERRVKGLRRMILG 584


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 447 QRTLRSIYADLVRRTQKLG 391
           QRT  + Y +LVRRTQ  G
Sbjct: 3   QRTTMARYPELVRRTQGRG 21


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 464 KPRALSNEPSARFTPILSGGHRNWEYRSIC 375
           KP  L   P      ++  G   WE R+IC
Sbjct: 40  KPEFLKINPQHCIPTLVDNGFALWESRAIC 69


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 610 CCCRDKHC 587
           CCCR  HC
Sbjct: 288 CCCRGSHC 295


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 464 KPRALSNEPSARFTPILSGGHRNWEYRSIC 375
           KP  L   P      ++  G   WE R+IC
Sbjct: 40  KPEFLKINPQHCIPTLVDNGFALWESRAIC 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 897,734
Number of Sequences: 2352
Number of extensions: 18340
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)