Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0392
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 83 3e-16
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 83 3e-16
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 81 1e-15
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 60 3e-09
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 56 4e-08
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 39 0.004
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical pr... 32 0.45
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 5.5
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 5.5
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 28 9.6
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 83.4 bits (197), Expect = 2e-16
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Frame = +1
Query: 184 VELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 363
+E+S+AE YDRQIRLWG+++Q ++R +KVLIIG LGAE+AK + L GV + L+D+
Sbjct: 1 MEVSKAEQAIYDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDH 60
Query: 364 EKLKQIDLYSQFL--CPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGV----DELPDSF 525
+ ++ FL D + + S LN V + + V D + +
Sbjct: 61 RLVDTEEIGMNFLYDASVDNSKMTKWAASYNFLYNLNRNVKLFIVEEDVLSKNDSEIEEY 120
Query: 526 FTEFDVVCATGLKQEQFERINNACRDSNKKFICGRRLG 639
T+F +V E+ ++NN CR + +FI G G
Sbjct: 121 LTKFTLVVVLDESYERTAKVNNICRKHHIRFISGAIYG 158
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 82.6 bits (195), Expect = 3e-16
Identities = 58/158 (36%), Positives = 76/158 (48%)
Frame = +1
Query: 169 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 348
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 10 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 67
Query: 349 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 528
+ D + K DL +Q+ +G NRA ER LN V+V T DEL + F
Sbjct: 68 TIHDTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVST---DELTEEFV 124
Query: 529 TEFDVVCATGLKQEQFERINNACRDSNKKFICGRRLGV 642
FD+V T + +I R N++ + GV
Sbjct: 125 KTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGV 162
Score = 34.7 bits (76), Expect = 0.084
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +1
Query: 187 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 345
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 402 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 461
Query: 346 --VCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 519
+ + D ++++ +L QFL +G ++E + N V + + + V +
Sbjct: 462 GLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETE 521
Query: 520 SFFTE 534
F +
Sbjct: 522 HIFND 526
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 82.6 bits (195), Expect = 3e-16
Identities = 58/158 (36%), Positives = 76/158 (48%)
Frame = +1
Query: 169 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 348
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 95 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 152
Query: 349 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 528
+ D + K DL +Q+ +G NRA ER LN V+V T DEL + F
Sbjct: 153 TIHDTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVST---DELTEEFV 209
Query: 529 TEFDVVCATGLKQEQFERINNACRDSNKKFICGRRLGV 642
FD+V T + +I R N++ + GV
Sbjct: 210 KTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGV 247
Score = 34.7 bits (76), Expect = 0.084
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Frame = +1
Query: 187 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 345
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 487 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 546
Query: 346 --VCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 519
+ + D ++++ +L QFL +G ++E + N V + + + V +
Sbjct: 547 GLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETE 606
Query: 520 SFFTE 534
F +
Sbjct: 607 HIFND 611
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 81.0 bits (191), Expect = 1e-15
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Frame = +1
Query: 211 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 390
+YDRQ+RLWG + Q + + ++G L EI K+++L GV+S ++D+ K++Q D+
Sbjct: 9 RYDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIG 68
Query: 391 SQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGL 561
F D IG +RAE +LE+ LNP V ++ ++ L T F VV A
Sbjct: 69 QNFFLHADDIGRSRAEATLEKLTELNPSVSGSASSQPPTALAMEDVEKLTTFSVVVAANQ 128
Query: 562 KQEQFERINNACRDSNKKFICGRRLGV 642
+E + FIC + G+
Sbjct: 129 NEEIDTTFAKVLYNIRVPFICIKTFGL 155
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Frame = +1
Query: 190 LSEAEAEQYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 363
+S+ +A +Y RQ+ + +G+ QK L+ VLI+G GLG +A + G+ ++ ++D
Sbjct: 10 ISKKDAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDY 69
Query: 364 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL-PDSFFTEFD 540
+ + +L+ Q D++G ++A+ + + N ++V H +D F ++
Sbjct: 70 DHISLDNLHRQVAYKEDQVGKSKAQALADNIKLQNSDLNVQVHNTSLDSSNAMQLFKNYE 129
Query: 541 VVCATGLKQEQFERINNACRDSNKKFICGRRL 636
+VC IN+ C N + G L
Sbjct: 130 IVCDCTDNVATRYLINDVCVLLNIPLVSGSAL 161
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/103 (26%), Positives = 57/103 (55%)
Frame = +1
Query: 238 GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDK 417
G ++ + L+ K+L+IG GLG E+ KN+ L+G +++ ++D + + +L QFL
Sbjct: 33 GPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESD 92
Query: 418 IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVV 546
+G ++AE + + VT+H +++ F+ +F ++
Sbjct: 93 VGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSII 135
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/128 (22%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +1
Query: 244 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIG 423
+ +++ +K+L+IG G+G E+ KN+ +TG + V ++D + + +L QFL + +
Sbjct: 6 EKHEKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVS 65
Query: 424 VNRAEGSLERARGLNPMVDVTSHTKGVDELPDS--FFTEFDVVCATGLKQEQFERINNAC 597
++A + + + P +++T + E + FF +D+V + +N C
Sbjct: 66 SSKAATATQVVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRMC 125
Query: 598 RDSNKKFI 621
+N+ I
Sbjct: 126 HAANRPLI 133
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/101 (22%), Positives = 55/101 (54%)
Frame = +1
Query: 229 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCP 408
R+ ++ +R+R V ++G+ G+G+ +A+ + G+ + L D +K+ +I ++
Sbjct: 72 RMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKV-EIANMNRLFYQ 130
Query: 409 PDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFT 531
P++ G+++ E + + +NP V + H + + D+F T
Sbjct: 131 PNQAGLSKVEAARDTLIHVNPDVQIEVHNFNITTM-DNFDT 170
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 253 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPD--KIGV 426
+R KVLI+G LG IA+ +I GV+ + LDN + + Q L + ++G
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 427 NRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDV 543
+AE + + + P + T+H V +P E DV
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV-PMPGHSIDEKDV 417
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 253 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPD--KIGV 426
+R KVLI+G LG IA+ +I GV+ + LDN + + Q L + ++G
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 427 NRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDV 543
+AE + + + P + T+H V +P E DV
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV-PMPGHSIDEKDV 417
>Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical
protein T12D8.10 protein.
Length = 98
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 633 SGGTYGYMFSDLVDHEYSEGDCTTQSHQ 716
SGG GY F L+ E EG CT QSH+
Sbjct: 27 SGGCDGYKFRLLIVSEAFEGKCTLQSHR 54
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
protein F46H5.4 protein.
Length = 2018
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 639 PQTSPADKLFVAVATSIVDSFELLLFETCCTYDVKFREEAVR*LIYALS 493
P+ KLFV V + D F LF + YD+K R++ + + ++
Sbjct: 251 PEQEETPKLFVKVEKAAADPFFEPLFASMAIYDIKNRQKVTESMYFNIA 299
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 601 DSNKKFICGRRLGVRTATCSLI*LITSTPREIVQHKATKRG 723
+S K F+ R+ GV T + ++ + PRE V KAT RG
Sbjct: 915 ESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRG 955
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 601 DSNKKFICGRRLGVRTATCSLI*LITSTPREIVQHKATKRG 723
+S K F+ R+ GV T + ++ + PRE V KAT RG
Sbjct: 915 ESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRG 955
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 601 DSNKKFICGRRLGVRTATCSLI*LITSTPREIVQHKATKRG 723
+S K F+ R+ GV T + ++ + PRE V KAT RG
Sbjct: 915 ESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRG 955
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 601 DSNKKFICGRRLGVRTATCSLI*LITSTPREIVQHKATKRG 723
+S K F+ R+ GV T + ++ + PRE V KAT RG
Sbjct: 915 ESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRG 955
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 179 LFPTIFCNAVIYNFNKFSTIFGYN 108
LF ++CN + YN+ + +FGY+
Sbjct: 9 LFFALYCNVLAYNYLVVAPVFGYS 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,938,629
Number of Sequences: 27780
Number of extensions: 421798
Number of successful extensions: 1141
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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