Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0386
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001409-1|AAN71164.1|  607|Drosophila melanogaster GH10640p pro...   119   3e-27
AE014296-2537|AAF49615.1|  607|Drosophila melanogaster CG16979-P...   119   3e-27
L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.        29   6.1  
AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH0931...    29   6.1  
AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA...    29   6.1  

>BT001409-1|AAN71164.1|  607|Drosophila melanogaster GH10640p
           protein.
          Length = 607

 Score =  119 bits (287), Expect = 3e-27
 Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
 Frame = +2

Query: 2   LKSTQQSSTGCLYGLMY-DGTLLVVGFSLESFETETEKNSYSQLLLNFPAEIELCGVVKF 178
           L+ T+Q  +GCL+G+ Y +GTLL++ F++ES      + +Y Q+   FPAE++LCG+VKF
Sbjct: 15  LERTKQQCSGCLFGVFYGEGTLLLLSFNIES---SLGQLNYEQIQHRFPAELDLCGLVKF 71

Query: 179 GETLTTDSTTKEILQDVDITDNPLII--IINREKDMKAHFIVHDKFEETKYEVFSPEELW 352
           G     ++   E+++ VDITDNP+++   +     ++A F VH K EE  YEV    +L+
Sbjct: 72  GGCTDGEAHLNEVIKSVDITDNPILLQCELGTLVGLRASFFVHGKLEEVPYEVMEAHQLY 131

Query: 353 KQFLHVRLNTVLPLRCEATISGVKNSLQNKRKKIASGQVSFHIDSTQVYL 502
             F   RL     L+  AT   V   +   RK++A G + F++  T++++
Sbjct: 132 NDFCFTRLQCGFFLQTAATPESVAREMHVLRKRVADGNLVFNVPQTKIFI 181


>AE014296-2537|AAF49615.1|  607|Drosophila melanogaster CG16979-PA
           protein.
          Length = 607

 Score =  119 bits (287), Expect = 3e-27
 Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
 Frame = +2

Query: 2   LKSTQQSSTGCLYGLMY-DGTLLVVGFSLESFETETEKNSYSQLLLNFPAEIELCGVVKF 178
           L+ T+Q  +GCL+G+ Y +GTLL++ F++ES      + +Y Q+   FPAE++LCG+VKF
Sbjct: 15  LERTKQQCSGCLFGVFYGEGTLLLLSFNIES---SLGQLNYEQIQHRFPAELDLCGLVKF 71

Query: 179 GETLTTDSTTKEILQDVDITDNPLII--IINREKDMKAHFIVHDKFEETKYEVFSPEELW 352
           G     ++   E+++ VDITDNP+++   +     ++A F VH K EE  YEV    +L+
Sbjct: 72  GGCTDGEAHLNEVIKSVDITDNPILLQCELGTLVGLRASFFVHGKLEEVPYEVMEAHQLY 131

Query: 353 KQFLHVRLNTVLPLRCEATISGVKNSLQNKRKKIASGQVSFHIDSTQVYL 502
             F   RL     L+  AT   V   +   RK++A G + F++  T++++
Sbjct: 132 NDFCFTRLQCGFFLQTAATPESVAREMHVLRKRVADGNLVFNVPQTKIFI 181


>L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.
          Length = 962

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 534 PVKP-TSDATPNKYTCVLSI*NDT*PEAI-FFLLFCSEFLTPEMVASHRRGSTVFK 373
           P KP T+D T   + C+ ++   T PEAI  F L+C E L   + A H     + K
Sbjct: 612 PSKPITNDDTDRIFVCLRTLSERT-PEAISVFTLYCREALGKMLDAQHDEDQRMLK 666


>AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH09317
           protein.
          Length = 964

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 534 PVKP-TSDATPNKYTCVLSI*NDT*PEAI-FFLLFCSEFLTPEMVASHRRGSTVFK 373
           P KP T+D T   + C+ ++   T PEAI  F L+C E L   + A H     + K
Sbjct: 613 PSKPITNDDTDRIFVCLRTLSERT-PEAISVFTLYCREALGKMLDAQHDEDQRMLK 667


>AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA
           protein.
          Length = 964

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 534 PVKP-TSDATPNKYTCVLSI*NDT*PEAI-FFLLFCSEFLTPEMVASHRRGSTVFK 373
           P KP T+D T   + C+ ++   T PEAI  F L+C E L   + A H     + K
Sbjct: 613 PSKPITNDDTDRIFVCLRTLSERT-PEAISVFTLYCREALGKMLDAQHDEDQRMLK 667


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,341,522
Number of Sequences: 53049
Number of extensions: 583116
Number of successful extensions: 1412
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)