Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0378
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.029
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 0.029
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +2

Query: 401 GEIGRGAFGAVNKM---VYRRTSRVMAVKRIRSTVDEKEQKQLLMDLEVVMKSNDCLYIV 571
           G IG GAFG V +    +       +AVK ++ +   +E +Q   ++ ++       YIV
Sbjct: 455 GVIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSEEIRQFTQEINIMKSVRQHPYIV 514

Query: 572 EFYGAL 589
              G +
Sbjct: 515 SLIGCV 520


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 GFCICAVVDENGTKATSLDGPLNGRSKILRFSVPNKFSS 219
           G+    +  ENG K T     +  R + +  ++PNK +S
Sbjct: 193 GYLELVIPPENGPKMTPNHLHIWPRGQFMMIALPNKDNS 231


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 GFCICAVVDENGTKATSLDGPLNGRSKILRFSVPNKFSS 219
           G+    +  ENG K T     +  R + +  ++PNK +S
Sbjct: 193 GYLELVIPPENGPKMTPNHLHIWPRGQFMMIALPNKDNS 231


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 335 GFCICAVVDENGTKATSLDGPLNGRSKILRFSVPNKFSS 219
           G+    +  ENG K T     +  R + +  ++PNK +S
Sbjct: 193 GYLELVIPPENGPKMTPNHLHIWPRGQFMMIALPNKDNS 231


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 457 CPSINHFIYSSKC 419
           C S+ +++YSSKC
Sbjct: 160 CFSMLNYVYSSKC 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,272
Number of Sequences: 336
Number of extensions: 3949
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)