Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0377
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 126 2e-30
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 89 5e-19
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 71 2e-13
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 65 8e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 61 1e-10
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 56 4e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 3e-05
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 39 8e-04
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 38 0.002
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 29 0.46
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 28 1.4
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 28 1.4
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 28 1.4
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 27 2.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 4.3
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 5.7
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 5.7
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 5.7
SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 25 7.5
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 25 9.9
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 25 9.9
SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr... 25 9.9
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 25 9.9
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 126 bits (305), Expect = 2e-30
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Frame = +1
Query: 163 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 342
++K +I+ + ++V+FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84
Query: 343 DLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELI 519
DL Y +RGYPTL F+NG I YSG R+ D ++ +++K+ P V+ S + + +
Sbjct: 85 DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQL-LPTVKPISKDTLENFV 143
Query: 520 D-ANTVIVFGFFSDQSSTRAKTFLSTAQVV-DDQVFAIVSDEKVIKEL 657
+ A+ + V FF DQ T+ A+V+ DD VFA D+++ K L
Sbjct: 144 EKADDLAVVAFFKDQKLN--DTYTEVAEVMKDDFVFAASDDKELAKSL 189
Score = 91.9 bits (218), Expect = 8e-20
Identities = 45/111 (40%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
Frame = +1
Query: 142 TEENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 318
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411
Query: 319 KVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKK 462
K+DAT E D+ S + G+PT+ FF+ +P+ Y G R +D+ +++ K
Sbjct: 412 KIDAT-ENDI--SVSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 89.0 bits (211), Expect = 5e-19
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 85 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 264
+L F AL L V +++ L T+ ++ + L+EFYA WCGHCKSLAP
Sbjct: 5 LLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKSLAPV 60
Query: 265 YAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS-PIDYSGGRQAD 438
Y + L E+ + + + K+DA D+A+ Y + G+PTL +F +GS P+ YS R D
Sbjct: 61 YEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVD 119
Query: 439 DIISWLKKKTGPPAVEVTSAEQAKELIDAN 528
+ ++ +KTG ++ EL N
Sbjct: 120 SLTQFVSEKTGIKKRKIVLPSNVVELDSLN 149
Score = 79.4 bits (187), Expect = 4e-16
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +1
Query: 151 NVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 327
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + E +++ K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199
Query: 328 ATQEQDLAESYGVRGYPTLKFF---RNGSPIDYSGGRQADDIISWLKKKTG 471
A D+ + V +PT+KFF P Y G R + +I ++ KK+G
Sbjct: 200 ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 70.9 bits (166), Expect = 2e-13
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Frame = +1
Query: 88 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 267
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 268 AKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNGSPI---DYSGGR 429
K A+ L P+ DA Q + + Y V+G+PT+K GS + DY+G R
Sbjct: 71 QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDR 129
Query: 430 QADDIISWLKKKTGPPAVEVTSAE 501
+ ++ P V++ ++E
Sbjct: 130 SYKSLQKFVSDSI-PSKVKILTSE 152
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 65.3 bits (152), Expect = 8e-12
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = +1
Query: 160 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 339
+ S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A + AKV+ ++
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63
Query: 340 QDLAESYGVRGYPTLKFFRNGSPIDYSGGR--QA--DDIISWLKKKTGPPAVEVTSAEQA 507
+ +A GV+ PT FF NG ID G QA + + K TG A+ +S+
Sbjct: 64 RQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPV 123
Query: 508 K 510
K
Sbjct: 124 K 124
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 61.3 bits (142), Expect = 1e-10
Identities = 35/101 (34%), Positives = 49/101 (48%)
Frame = +1
Query: 160 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 339
V S ++ T IS + +V+FYA WCG CK L P KL+E+ V+A +
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77
Query: 340 QDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 462
D+A+ GV PT+ FR G +D G + S L K
Sbjct: 78 SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 56.4 bits (130), Expect = 4e-09
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 160 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 339
V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60
Query: 340 QDLAESYGVRGYPTLKFFRNGSPID 414
++A GV P+ ++NG I+
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIE 85
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/143 (18%), Positives = 62/143 (43%)
Frame = +1
Query: 139 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 318
PT + + A+ + ++ E ++FY+ C C ++ + A ++ + +A
Sbjct: 278 PTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRM---RGKLNVA 334
Query: 319 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSA 498
++ + + Y ++ +PT FF+ + ++Y G D++S+ ++ EV
Sbjct: 335 HINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELL 394
Query: 499 EQAKELIDANTVIVFGFFSDQSS 567
+ + N + F +F D S
Sbjct: 395 DTVN--AEKNGDVFFLYFYDDDS 415
Score = 42.7 bits (96), Expect = 5e-05
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 163 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQ 336
L+ + E+ +S + +++Y P CG CK L P + K E E S +VD ++
Sbjct: 31 LTDNDLESEVSKGTWF-IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 337 EQDLAESYGVRGYPTLKFFRNGSPID 414
E L+ +R PTL ++NG ++
Sbjct: 90 E--LSSCANIRAVPTLYLYQNGEIVE 113
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 38.7 bits (86), Expect = 8e-04
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +1
Query: 202 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 381
+ IL+ FYAPW CK + + + A++ K++A + D+AES+ V P
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76
Query: 382 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKE 513
+ G + + + + P +++S + E
Sbjct: 77 FVLIHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/87 (17%), Positives = 43/87 (49%)
Frame = +1
Query: 241 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 420
HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+
Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267
Query: 421 GGRQADDIISWLKKKTGPPAVEVTSAE 501
G + ++S+ + A+++ +
Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGD 294
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +1
Query: 346 LAESYGVRGYPTLKFFRNGSPIDYSG--GRQADD---IISWLKKKTGPPAVEVT 492
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 29.5 bits (63), Expect = 0.46
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +1
Query: 241 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 420
+C L P +AA L + +SP L VDA + L S+GVR + G+ +
Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240
Query: 421 GGRQADDIISWLKKKTGPPAVEVTSA 498
G A ++S K K AV+ T+A
Sbjct: 241 NGESA--LVSACKVK----AVDTTAA 260
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 27.9 bits (59), Expect = 1.4
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Frame = +1
Query: 229 PWCG-HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 405
PW + ++L + + KL E + K D + L G++ Y ++ F N
Sbjct: 226 PWKNPNTENLTSQVSIKEPKLYEPHPTTAIKKADGKIIRILVIDVGMK-YNQIRCFLNRG 284
Query: 406 ------PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGF-FSDQS 564
P DY ++ D + ++ G P++ ++ K ++++ TV VFG F Q
Sbjct: 285 VELLVVPWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFGICFGHQI 343
Query: 565 STRA 576
RA
Sbjct: 344 MARA 347
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 421 GGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSD-QSSTRAKTFLSTA 597
GGR D + +K+G V E +E+ + + F S+ +S T K + T
Sbjct: 186 GGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTY 245
Query: 598 QVVDDQVFAI 627
Q+ D+Q +
Sbjct: 246 QLPDNQTITL 255
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 587 RKVLALVELWSEKKPNTITVLASISSLACSAEVTSTA 477
+K +L + W + + LASISS A SA + ST+
Sbjct: 673 KKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 510 FSLFSRGNLNSRGASLLLQPTDDVISLTTT*IVDRT 403
F S+GNL+ SLL +D+V +TTT +VD T
Sbjct: 304 FEFDSKGNLD---VSLLKSLSDEVNMITTTSLVDNT 336
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 332 VASTFASLIGDSSSASFVAALAYSGARDLQW 240
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 87 NTHCDIIGTFLL 52
NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 149 KMCSF*VKLTLKL*FQPRSTF*LNSMLHGAATANLWHRNTP 271
K +F L QP T N +L+ + NLW R+ P
Sbjct: 620 KSANFDFSFLKSLDLQPTITLGKNDLLNAILSQNLWFRSLP 660
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 5.7
Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
Frame = +1
Query: 253 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 432
++P Y A A S + +T RG+PT + N +P Y
Sbjct: 271 VSPMYGSHAAPYASTPSAAVGSSRGSTPASATVPISPARGFPTTSAY-NPAPPAYGMANP 329
Query: 433 A---DDIISWLKKKTGP---PAVEVTSAEQAKELIDANTVIVFGFFSDQSSTRAKTFLST 594
A I S +G P++ TSA+ N + D+++T+A
Sbjct: 330 AYGSTGIRSSSIPSSGSIRSPSLTTTSAQATTNA--TNNITTTTAAQDENATKAALIAQL 387
Query: 595 AQVVDDQVFAIVSDEK 642
+ DDQ+ + D+K
Sbjct: 388 MALTDDQINVLPPDQK 403
>SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 508 KELIDANTVIVFGFFSDQSSTRAKTFLST--AQVVDDQVFAIVSDEKVIKELEA 663
K+ + ++ +G F T FLST +++++Q + EK++KE+ +
Sbjct: 77 KDTTNRDSPFFYGLFDGHGGTECSEFLSTNLGKIIENQ--DLNDTEKILKEVHS 128
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 166 SKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
+K N +T S T+++ Y WCGH YA +L PI L++
Sbjct: 214 TKLNNDTN-SETDFLGYNMYE-WCGHSDFYTSGYAARTQELENFTIPIFLSE 263
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 409 IDYSGGRQADDIISWLKKKTGPPAVEVTSAEQA 507
++ SGG + D +I W+ K TG A ++ +A
Sbjct: 389 VNNSGGPKFDIVIPWIGKPTGFHASTISEYAEA 421
>SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.0 bits (52), Expect = 9.9
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Frame = +1
Query: 133 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIK 312
E P+ E+V + S ++ EY L + ++++ A LA+ P
Sbjct: 197 EDPSSESVNINSSSSLLPDSPVNEYGLEPHIMRFMEITETISGMRDLIAFTLAQRSGPTS 256
Query: 313 LAKVDAT--QEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK---KTGPP 477
AT Q+Q + P + N +P ++G + D+ S PP
Sbjct: 257 ALHKFATALQQQHQMQKSTSSNIP----YANPAPSGFNGSPRNGDVASLASNYRYAKQPP 312
Query: 478 AVEVTSAEQAKELIDANTV 534
+ + QA L+D N +
Sbjct: 313 TMPANAISQANRLLDQNNI 331
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +1
Query: 145 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKL 315
+ENV ++ K+N+ + +T E + + + G+ ++ P YA ++ ++S K+
Sbjct: 4 KENVNLVEKSNYVALENTREIDVFDEFLNAIGNENTITPVYADSSLTHLRKKSYTKV 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,555,092
Number of Sequences: 5004
Number of extensions: 47924
Number of successful extensions: 161
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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