Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0377
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 219 2e-57
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 139 2e-33
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 112 3e-25
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 104 7e-23
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 90 1e-18
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 83 3e-16
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 74 9e-14
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 3e-12
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 59 3e-09
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 59 4e-09
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 59 4e-09
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 50 1e-06
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 48 5e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 44 1e-04
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.007
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 2.6
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 2.6
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 3.4
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 29 3.4
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.5
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 28 6.0
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 7.9
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 219 bits (535), Expect = 2e-57
Identities = 101/187 (54%), Positives = 137/187 (73%)
Frame = +1
Query: 79 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLA 258
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 259 PEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQAD 438
PEYAKAA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A
Sbjct: 61 PEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAP 120
Query: 439 DIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSTRAKTFLSTAQVVDDQV 618
+I+SWL KKTGPPA ++ +A+ K+ I V V GFF+D+ S AK FLS A +DD
Sbjct: 121 EIVSWLNKKTGPPAKDLATADAMKDFI-TKEVAVVGFFTDKESDAAKAFLSAADGIDDVE 179
Query: 619 FAIVSDE 639
F IVSD+
Sbjct: 180 FGIVSDK 186
Score = 86.6 bits (205), Expect = 2e-17
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Frame = +1
Query: 64 ADNIAMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVISTTEY-ILVEFYAP 231
++N+ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 232 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSP 408
WCGHCK LAP + + K ++ + I +AK+D+T + E V +PT+K+F + G
Sbjct: 413 WCGHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEA 469
Query: 409 IDYSGGRQADDIISWLK---KKTGPPAVE 486
+DY+GGR DD + +L+ K PA E
Sbjct: 470 VDYNGGRTLDDFVKFLESGGKAGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 145 bits (351), Expect = 3e-35
Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Frame = +1
Query: 130 DEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 309
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ + P+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPV 114
Query: 310 KLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG-----P 474
AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++ P
Sbjct: 115 PFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWKPP 174
Query: 475 PAVEVT-SAEQAKELIDANTVIVFGFFS 555
P +T + E E+++ ++++ FF+
Sbjct: 175 PVAALTLTKENFTEVVNRESLMLVEFFA 202
Score = 138 bits (334), Expect = 4e-33
Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
Frame = +1
Query: 139 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 318
P L L+K NF V++ +LVEF+APWCGHCK LAPEY KAA +L + + PI LA
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLA 232
Query: 319 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSA 498
VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP + ++S
Sbjct: 233 IVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSRILSSL 292
Query: 499 EQAKELI-DANTVIVFGFFSDQSSTRAKTFL-STAQVVDDQVFAIVSD 636
+ ++ + + + V + GFF + +++L + V DD FA D
Sbjct: 293 KAVQDFMKEKDDVTIMGFFDGEDDKMLESYLEANNDVRDDYPFAHTFD 340
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Frame = +1
Query: 145 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKV 324
E +V+ K E V + +L+EFYAPWCG +L P + K +++ I +AK+
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKN-IVIAKI 581
Query: 325 DATQEQDLAESYGVRGYPTLKFFRN---GSPIDYSGGRQADDIISWLKKKTGPPAVEVTS 495
DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K A S
Sbjct: 582 DAT-ANDVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK----ATVSLS 636
Query: 496 AEQAKE 513
E+AK+
Sbjct: 637 KEKAKD 642
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 139 bits (337), Expect = 2e-33
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 4/178 (2%)
Frame = +1
Query: 151 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 330
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAKVD
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDC 598
Query: 331 TQE-QDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQ 504
T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP +VE+ S +
Sbjct: 599 TEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDH 658
Query: 505 -AKELIDANTVIVFGFFSDQSSTRAKTFLSTAQVVDDQV-FAIVSDEKVIKELEAEDE 672
K+L DA + +V GF D F+ TA + D FA S V+++ +++
Sbjct: 659 LEKKLDDAESNVVVGFL-DGDDDLKNAFMRTANEMRDSFSFAHASVTDVLEKYNYKNQ 715
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 154 VLVLSKANFETVIST-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 330
V V+ NF+ +++ T+ +L+EFYAPWCGHCKSL P+Y + KL ++ I +AK+DA
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDA 922
Query: 331 TQEQDLAESYGVRG 372
T D ++ V+G
Sbjct: 923 T-ANDAPPNFSVQG 935
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 358 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 471
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 112 bits (269), Expect = 3e-25
Identities = 50/112 (44%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = +1
Query: 142 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
T+ V+ L+K NF+ V++ ++ LVEFYAPWCGHCK LAP Y + + + S + +AK
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG-EAYTQSSDVIIAK 78
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 471
VDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 79 VDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 104 bits (249), Expect = 7e-23
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Frame = +1
Query: 145 EENVLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
+E+V+ L+ NFE V+++ + LVEF+APWCGHC+ LAPE+AKAAT+L + +K+
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL---KGKVKVGA 134
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKKKTG----- 471
+DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 135 LDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEP 194
Query: 472 PPAVEVTSAEQAKELIDANTVIVFGFFS---DQSSTRAKTFLSTAQVVDDQ 615
P ++ S E KE + + + V F D ++ T+L+ + + ++
Sbjct: 195 PEVIQAISNEVLKEGCNEHPICVIAFLPHILDSGASGRNTYLANLKELGEK 245
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 340 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 447
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +1
Query: 145 EENVLV--LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 318
E++ LV L ++F ++ TE++LV FYAPWCGHCK+ P+Y KAA ++ + + A
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV-FA 202
Query: 319 KVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 474
K+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 203 KLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 81.0 bits (191), Expect = 8e-16
Identities = 35/114 (30%), Positives = 61/114 (53%)
Frame = +1
Query: 115 GLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 294
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 295 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 456
E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 99 EDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 130 DEVP---TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 300
DE P T V+ L F+ ++ +LV FYAPWCGHCK++ PEY AA L E+E
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 301 SPIKLAKVDATQEQDLAESYGVRGYPT 381
P LA VDAT+E L + + V GYPT
Sbjct: 133 IPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 64.9 bits (151), Expect = 6e-11
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Frame = +1
Query: 133 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAA----------- 279
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKNKRAL 249
Query: 280 ---------TKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 432
L I A VD T+E + + +GV GY F + Y+ GR+
Sbjct: 250 SLRDFDFSNDTLCNRRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGRE 305
Query: 433 ADDIISWL-KKKTGPP 477
A D I ++ + GPP
Sbjct: 306 AKDFIQFMDDPREGPP 321
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 208 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 297
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 74.1 bits (174), Expect = 9e-14
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +1
Query: 118 LALGDEVPTEENVLV-LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATK-LA 291
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A + L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLI 182
Query: 292 EEESPIKLAKVDATQE----QDLAESYGVRGYPTLKFFRNGSPID 414
+ ++LAKVD + + + Y V+ PT+ F +G ++
Sbjct: 183 LSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVE 227
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 139 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 318
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + ++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFA 107
Query: 319 KV 324
KV
Sbjct: 108 KV 109
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 73.3 bits (172), Expect = 2e-13
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 163 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 342
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + + AKVD T +
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA-AKGLFQFAKVDCTDPR 83
Query: 343 D--LAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKT 468
L +++ + GYP++K F+ G DY G R ++++++ T
Sbjct: 84 SKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVT 128
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 118 LALGDEVPTEENVLVLSKANF-ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 294
+AL + NV L +F +V S + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG 333
Query: 295 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 459
+ P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 334 K--PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 160 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 339
V SK F V+++ + +V+FYAPWCG C AP+Y + A L + ++ AKV+ Q+
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQD 494
Query: 340 QDLAESYGVRGYPTLKFF 393
L + YPT++ +
Sbjct: 495 YGLCSEANIHSYPTVRLY 512
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +1
Query: 151 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAK
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +1
Query: 151 NVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
NV+V+ +F +V + + ++++F A WCG CKS+AP + + K + + K
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD----VVFLK 64
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNGSPID 414
VD Q Q AES G+R PT F+ N + ID
Sbjct: 65 VDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +1
Query: 151 NVLVL---SKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
NV VL S+ E + T+ ++ +F A WCG CKS+AP Y + L+E+ K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY----SGLSEKYKQAVFLK 63
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 471
+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 148 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 327
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ + I + K +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDD-IVVGKSN 84
Query: 328 ATQEQDLAESYGVRGYPTLKFFRNGSPID--YSGGRQADDIISWLKKKT 468
A ++ +A Y + YP ++F GS + Y GG + DD I ++ ++
Sbjct: 85 AYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDGGFKPDDFIRFIAARS 133
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 145 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKL-AK 321
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E + A
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKAL 80
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNG 402
++ Q GV + TL + G
Sbjct: 81 MNTNSTQTTCLPMGVHYWRTLLAYTIG 107
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 142 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 321
+E V +L+K F+ I + V+FYAPWC HC LAP + + A ++ + I ++K
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISK 145
Query: 322 VDATQEQDLAESYGVRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 456
++ GYPTL F++G +YSG R D + ++
Sbjct: 146 IN--------------GYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +1
Query: 253 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 432
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +G Y+G R
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRN 60
Query: 433 ADDIISWLKK 462
A+D+ ++ K
Sbjct: 61 AEDMKVFVDK 70
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 181 ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 360
+ VI+ + +L+ FY PWCG C + AP A + ++ S + + ++DA Q DL +
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNL 586
Query: 361 GVRGYPTLKFFRNG 402
V YP++ F G
Sbjct: 587 TVSSYPSIILFPAG 600
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 169 KANFETVISTTE--YILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 336
+A F +VI+ T+ ++++FYA WCG C+ + P++ K A EE + AK+D +
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +1
Query: 148 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKS--LAPEYAKAATKLAEEESP--IKL 315
+ V+ L + NF+ + ++ +++ FY H S L + +A P + +
Sbjct: 47 KRVIDLDRNNFDRTLKQSKMLVLLFYLSSRSHPDSEKLWKSDRQMLEVVARILQPQGVTV 106
Query: 316 AKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTS 495
A V+ +E +LA+ GV+ + F G ++Y G + + + + PP + +
Sbjct: 107 AAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTNIDN 165
Query: 496 AEQAKELIDANTVIVFGFFSDQSSTRAKTFLSTAQVVDDQV-FAIVSDEK 642
+Q L DA V G+F D + + K F A+ + F +V+D+K
Sbjct: 166 KKQRTLLEDAEGTKVVGYF-DLENPQFKEFEEAAKNFQPLIPFYVVTDKK 214
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 226 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 405
A WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G
Sbjct: 46 ACWCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
Query: 406 PIDY 417
+++
Sbjct: 103 VMEH 106
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 232 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 411
WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G I
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 412 D 414
+
Sbjct: 59 N 59
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 178 FETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 327
F+ + E ++F A WCG C+ + P++ ++A+E +K AKVD
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 358 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 471
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 151 NVLVLSKANFETVISTTEYILVEFYA 228
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 214 VEFYAPWCGHCKSLAPEYAKAATKL 288
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 175 NFETVISTTEYIL--VEFYAPWCGHCKSL 255
+F+ ++S++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 364 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 456
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 232 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 345
WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +1
Query: 394 RNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSTR 573
R+ +P+ +G DDI + L + PP E A E+ A+ +V G + ++ T
Sbjct: 173 RDLTPLPGNGVPTLDDIPAVLIAEDRPPTYSEAVEEDALEMTAADVAVVHGGHTGETDTE 232
Query: 574 AKTFLSTAQVVDDQVF 621
T AQ +D+ +
Sbjct: 233 PPT--EEAQGLDNPAY 246
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 310 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 411
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +1
Query: 214 VEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 360
+ F A WC C++ PE + + + ++ V + + QD + Y
Sbjct: 178 IYFSAHWCPPCRAFTPELVSTYDAVRKANNAFEVIFVSSDRSQDSFKDY 226
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 202 EYILVEFYAPWCGHCKSLAPEYAKAAT 282
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,010,992
Number of Sequences: 59808
Number of extensions: 360885
Number of successful extensions: 1069
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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