Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0374
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.85 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.85 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   0.85 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   0.85 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   3.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   3.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.9  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 199 HADRL*YIQHL*TFKGNNNARSRKKLKVF 285
           HAD + YI ++  F  + N R R  +K+F
Sbjct: 444 HADDVPYIFNMGLFDTSRNHRDRAMIKIF 472


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 199 HADRL*YIQHL*TFKGNNNARSRKKLKVF 285
           HAD + YI ++  F  + N R R  +K+F
Sbjct: 444 HADDVPYIFNMGLFDTSRNHRDRAMIKIF 472


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 199 HADRL*YIQHL*TFKGNNNARSRKKLKVF 285
           HAD + YI ++  F  + N R R  +K+F
Sbjct: 444 HADDVPYIFNMGLFDTSRNHRDRAMIKIF 472


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 199 HADRL*YIQHL*TFKGNNNARSRKKLKVF 285
           HAD + YI ++  F  + N R R  +K+F
Sbjct: 444 HADDVPYIFNMGLFDTSRNHRDRAMIKIF 472


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +2

Query: 236 PLREIITQGVVKNLKFSLNILSTADSLKTDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVR 415
           P  +    G ++N+K      +   S+   FF+ V  SL  L L     L  TK      
Sbjct: 212 PFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATK--DLFG 269

Query: 416 HLKSLQTLDVTYTDI 460
           ++  LQ LD+++  +
Sbjct: 270 NMPHLQVLDLSHNSL 284



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 359 LSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDIS 463
           LSLS   +   T  ++   ++ SL+ L++ Y D+S
Sbjct: 469 LSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLS 503


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +2

Query: 107 VSNPTKVKMEESPALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFS 286
           +S+P+  K      L    A+  + + +   TP     Y   K L+         NLKFS
Sbjct: 72  ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQKTLQANNNDASNGNLKFS 131

Query: 287 LNILSTAD 310
           ++ +  AD
Sbjct: 132 IDNILKAD 139


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 199 HADRL*YIQHL*TFKGNNNARSRKKLKVF 285
           H D + YI ++  F  + N R R  +K+F
Sbjct: 444 HGDDVPYIFNMGLFDTSRNHRDRAMVKIF 472


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/68 (22%), Positives = 26/68 (38%)
 Frame = -3

Query: 279 FKFFTTPCVIISLKGLQVLYIL*TVGVSKYFMINIIISAGKFNNAGLSSILTLVGFETAL 100
           F  F  P  ++   G  +  I     +   F++  +++  K     L+  L        L
Sbjct: 93  FSGFIVPSGVVYKIGYWLHQICHICELHTIFLVCNVLTVFKIRYKDLNKALESSKISVGL 152

Query: 99  IRDQQILY 76
           IRD  +LY
Sbjct: 153 IRDTAVLY 160


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 385 NEN*THTGRTPFE 423
           N   THTG  PFE
Sbjct: 152 NHERTHTGEKPFE 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,879
Number of Sequences: 336
Number of extensions: 3758
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)