Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0374
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY736034-1|AAU50678.1| 478|Homo sapiens F-box and WD-40 repeat ... 36 0.12
BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kin... 35 0.27
AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kin... 35 0.27
AK127729-1|BAC87105.1| 870|Homo sapiens protein ( Homo sapiens ... 35 0.27
BC063415-1|AAH63415.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.9
AL627424-2|CAI41027.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.9
AL627144-3|CAI12232.1| 412|Homo sapiens F-box and WD repeat dom... 32 1.9
AF281859-1|AAG22739.1| 412|Homo sapiens dactylin protein. 32 1.9
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 7.7
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 7.7
>AY736034-1|AAU50678.1| 478|Homo sapiens F-box and WD-40 repeat
containing protein 9 protein.
Length = 478
Score = 36.3 bits (80), Expect = 0.12
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 119 TKVKMEESPALLNLPAEMIILIIKYLDTPTVYNIYN-TCKPLREIITQGVVKNLK 280
++V P LL+LP E+++ I YLD V ++ + C LR++++ V L+
Sbjct: 69 SRVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLR 123
>BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 35.1 bits (77), Expect = 0.27
Identities = 31/130 (23%), Positives = 54/130 (41%)
Frame = +2
Query: 320 TDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISICDLLDIHPLCP 499
T F + + +LK L+ +H T + + + LDV+ DI +LD CP
Sbjct: 1024 TSFPQQLCETLKSLTHLDLHSNKFTSFPSYLLKMSCIANLDVSRNDIGPSVVLDPTVKCP 1083
Query: 500 TVKNIAINYIFGKLGMTRMTPEFIEACQNLLAKFENIHFVGSSINLMYSNFSIHVLNKTK 679
T+K ++Y +T + +E + L+ + I + S + L I L+K
Sbjct: 1084 TLKQFNLSYNQLSFVPENLT-DVVEKLEQLILEGNKISGICSPLRL--KELKILNLSKNH 1140
Query: 680 LQSLKYTISE 709
+ SL E
Sbjct: 1141 ISSLSENFLE 1150
>AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 35.1 bits (77), Expect = 0.27
Identities = 31/130 (23%), Positives = 54/130 (41%)
Frame = +2
Query: 320 TDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISICDLLDIHPLCP 499
T F + + +LK L+ +H T + + + LDV+ DI +LD CP
Sbjct: 1024 TSFPQQLCETLKSLTHLDLHSNKFTSFPSYLLKMSCIANLDVSRNDIGPSVVLDPTVKCP 1083
Query: 500 TVKNIAINYIFGKLGMTRMTPEFIEACQNLLAKFENIHFVGSSINLMYSNFSIHVLNKTK 679
T+K ++Y +T + +E + L+ + I + S + L I L+K
Sbjct: 1084 TLKQFNLSYNQLSFVPENLT-DVVEKLEQLILEGNKISGICSPLRL--KELKILNLSKNH 1140
Query: 680 LQSLKYTISE 709
+ SL E
Sbjct: 1141 ISSLSENFLE 1150
>AK127729-1|BAC87105.1| 870|Homo sapiens protein ( Homo sapiens cDNA
FLJ45829 fis, clone NT2RP8006452. ).
Length = 870
Score = 35.1 bits (77), Expect = 0.27
Identities = 31/130 (23%), Positives = 54/130 (41%)
Frame = +2
Query: 320 TDFFKAVAYSLKDLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDISICDLLDIHPLCP 499
T F + + +LK L+ +H T + + + LDV+ DI +LD CP
Sbjct: 623 TSFPQQLCETLKSLTHLDLHSNKFTSFPSYLLKMSCIANLDVSRNDIGPSVVLDPTVKCP 682
Query: 500 TVKNIAINYIFGKLGMTRMTPEFIEACQNLLAKFENIHFVGSSINLMYSNFSIHVLNKTK 679
T+K ++Y +T + +E + L+ + I + S + L I L+K
Sbjct: 683 TLKQFNLSYNQLSFVPENLT-DVVEKLEQLILEGNKISGICSPLRL--KELKILNLSKNH 739
Query: 680 LQSLKYTISE 709
+ SL E
Sbjct: 740 ISSLSENFLE 749
>BC063415-1|AAH63415.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 143 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 322
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 323 DFFKAV 340
D +V
Sbjct: 86 DLMTSV 91
>AL627424-2|CAI41027.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 143 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 322
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 323 DFFKAV 340
D +V
Sbjct: 86 DLMTSV 91
>AL627144-3|CAI12232.1| 412|Homo sapiens F-box and WD repeat domain
containing 4 protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 143 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 322
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 323 DFFKAV 340
D +V
Sbjct: 86 DLMTSV 91
>AF281859-1|AAG22739.1| 412|Homo sapiens dactylin protein.
Length = 412
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 143 PALLNLPAEMIILIIKYLDTPTVYNIYNTCKPLREIITQGVVKNLKFSLNILSTADSLKT 322
PAL LP E+++LI YLD + + C+ LR + ++ ++ S L T
Sbjct: 26 PALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGT 85
Query: 323 DFFKAV 340
D +V
Sbjct: 86 DLMTSV 91
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 356 DLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI--SICDL 475
DL S L++ + I+ V+H ++LQ TY D+ S+CDL
Sbjct: 3987 DLEPSPQPPLSRAEAIKQVKHFRALQEQARTYLDLLCSMCDL 4028
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 356 DLSLSGMHDLTKTKLIQAVRHLKSLQTLDVTYTDI--SICDL 475
DL S L++ + I+ V+H ++LQ TY D+ S+CDL
Sbjct: 4058 DLEPSPQPPLSRAEAIKQVKHFRALQEQARTYLDLLCSMCDL 4099
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,253,872
Number of Sequences: 237096
Number of extensions: 1770469
Number of successful extensions: 10843
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10843
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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