Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0372
(364 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 1.7
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 1.7
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 2.2
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 3.9
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 3.9
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 3.9
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 3.9
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 20 6.8
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 20 6.8
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 20 6.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 20 6.8
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 20 6.8
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 20 6.8
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.2 bits (45), Expect = 1.7
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 3 FSVNFCIGEVYQNGQTYQKGWN--YWQ 77
F+ N+ + Y N YQ+G++ Y+Q
Sbjct: 211 FNFNYQYNQAYSNYNNYQEGFSCQYYQ 237
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 1.7
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 3 FSVNFCIGEVYQNGQTYQKGWN--YWQ 77
F+ N+ + Y N YQ+G++ Y+Q
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGFSCQYYQ 257
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.8 bits (44), Expect = 2.2
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +1
Query: 76 KYGTR-YGASLRKMVKKMEVTQHAKYTCSFCGK 171
KY R + S ++ + T Y+C CGK
Sbjct: 83 KYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 58 FWYVWPFW*TSPIQKLTEK 2
FW++W TS ++K +K
Sbjct: 411 FWFMWKAKGTSGLEKHVDK 429
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 182 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 319
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 182 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 319
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +2
Query: 182 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 319
+V+V GLV + + GY L + D+ + + + ++N
Sbjct: 8 SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 20.2 bits (40), Expect = 6.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 107 VKWSKRWK*PNTQSI 151
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 20.2 bits (40), Expect = 6.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 7 LSTFVSERFTKMAKRTKKV 63
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 20.2 bits (40), Expect = 6.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 7 LSTFVSERFTKMAKRTKKV 63
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 20.2 bits (40), Expect = 6.8
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 174 ILTTK*ASILCVLGYFHLFDHFT*RGTVTCAIFASNSNL 58
I T +LC+ +F F FT CA N +L
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHL 193
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 20.2 bits (40), Expect = 6.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 7 LSTFVSERFTKMAKRTKKV 63
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 20.2 bits (40), Expect = 6.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 107 VKWSKRWK*PNTQSI 151
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,883
Number of Sequences: 336
Number of extensions: 1913
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7404950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -