Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0372
(364 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a pr... 152 4e-37
L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a pr... 152 4e-37
CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein. 152 4e-37
BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a ... 152 4e-37
BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a ... 152 4e-37
BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a ... 152 4e-37
BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a ... 152 4e-37
AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein. 152 4e-37
BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein. 150 2e-36
BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein. 130 1e-30
AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3 prot... 29 3.4
BC048806-1|AAH48806.1| 126|Homo sapiens chromosome 17 open read... 29 5.9
BC036356-1|AAH36356.1| 264|Homo sapiens C17orf64 protein protein. 29 5.9
AY577304-1|AAT84393.1| 128|Homo sapiens immunoglobulin heavy ch... 28 7.8
>X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein.
Length = 92
Score = 152 bits (368), Expect = 4e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein.
Length = 91
Score = 150 bits (363), Expect = 2e-36
Identities = 65/89 (73%), Positives = 77/89 (86%)
Frame = +1
Query: 43 AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCK 222
AKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 60
Query: 223 RTVAGGAWVFSTTAASSCRSAVRRLREVK 309
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 KTVAGGAWTYNTTSAVTVKSAIRRLKELK 89
>BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein.
Length = 72
Score = 130 bits (314), Expect = 1e-30
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 220 KRTVAGGAWVF 252
+TVAGGAW +
Sbjct: 61 MKTVAGGAWTY 71
>AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3
protein.
Length = 173
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 39 NGQTYQKGWNYWQIWHTL 92
NGQ W YW+ WH L
Sbjct: 148 NGQKLVGSWGYWEAWHCL 165
>BC048806-1|AAH48806.1| 126|Homo sapiens chromosome 17 open reading
frame 64 protein.
Length = 126
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 103 LRKMVKKMEVTQHAKYTCSFCGKDAMKRS 189
LR++ K + +Q AK+ +FC DA +RS
Sbjct: 17 LRRLYKYTKSSQPAKFLVTFCASDAPERS 45
>BC036356-1|AAH36356.1| 264|Homo sapiens C17orf64 protein protein.
Length = 264
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 103 LRKMVKKMEVTQHAKYTCSFCGKDAMKRS 189
LR++ K + +Q AK+ +FC DA +RS
Sbjct: 155 LRRLYKYTKSSQPAKFLVTFCASDAPERS 183
>AY577304-1|AAT84393.1| 128|Homo sapiens immunoglobulin heavy chain
variable region protein protein.
Length = 128
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNP 137
+Y ++Y GWNY+ W ++ +G NP
Sbjct: 93 MYYCARSYSTGWNYFDYWGQGTLVTVSSGSASAPNP 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,049,059
Number of Sequences: 237096
Number of extensions: 1080803
Number of successful extensions: 3577
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3577
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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