Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0372
(364 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p pro... 177 3e-45
AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p pro... 177 3e-45
AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,... 177 3e-45
AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,... 177 3e-45
BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p pro... 32 0.26
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P... 31 0.60
AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA... 30 1.0
AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein... 29 1.4
BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p pro... 29 1.8
AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p pro... 29 1.8
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact... 29 1.8
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA... 29 1.8
X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein p... 28 4.2
BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p pro... 28 4.2
AL009195-2|CAA15706.1| 1192|Drosophila melanogaster EG:30B8.2,FB... 28 4.2
AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA ... 28 4.2
EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein. 27 7.4
AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p pro... 27 7.4
AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA... 27 7.4
>AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p
protein.
Length = 92
Score = 177 bits (432), Expect = 3e-45
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90
>AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p
protein.
Length = 92
Score = 177 bits (432), Expect = 3e-45
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90
>AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,
isoform B protein.
Length = 92
Score = 177 bits (432), Expect = 3e-45
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90
>AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,
isoform A protein.
Length = 92
Score = 177 bits (432), Expect = 3e-45
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = +1
Query: 40 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 219
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 220 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 309
KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90
>BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p
protein.
Length = 918
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -3
Query: 140 CWVTSIFLTILRREAP*RVPYLPVIPTFLVRLAILVNLSDTKVDR 6
C V SI LTI R+PY+ +I FL L++L+NL T DR
Sbjct: 543 CVVLSI-LTIALTAIGLRIPYMCMISLFLYILSLLINLLTTLHDR 586
>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
protein.
Length = 1290
Score = 30.7 bits (66), Expect = 0.60
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 73 GKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK 171
G YG+ +G S M+ M +H + C +C K
Sbjct: 219 GWYGSEFGLSAYGMLMAMSHAEHLPFKCEYCSK 251
>AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA
protein.
Length = 1736
Score = 29.9 bits (64), Expect = 1.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 124 MEVTQHAKYTCSFCGKDAMKRSCV 195
M+ TQH +TC +C + A +R+ V
Sbjct: 353 MQYTQHTTHTCDYCKRTASQRTAV 376
>AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein
protein.
Length = 1192
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -3
Query: 269 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 123
EAA ENT PPA L + + P RF S QN Y C V ++
Sbjct: 778 EAAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830
>BT023818-1|AAZ86739.1| 909|Drosophila melanogaster SD18573p
protein.
Length = 909
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 287 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 141
T +L D E++Q APP L R D E F+ASLP++E Y+A
Sbjct: 596 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 646
>AY128427-1|AAM75020.1| 558|Drosophila melanogaster GH23001p
protein.
Length = 558
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 287 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 141
T +L D E++Q APP L R D E F+ASLP++E Y+A
Sbjct: 245 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 295
>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
16 protein.
Length = 1518
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 287 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 141
T +L D E++Q APP L R D E F+ASLP++E Y+A
Sbjct: 1205 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 1255
>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
protein.
Length = 1744
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 287 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 141
T +L D E++Q APP L R D E F+ASLP++E Y+A
Sbjct: 1431 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 1481
>X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein
protein.
Length = 1090
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -3
Query: 269 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 123
E A ENT PPA L + + P RF S QN Y C V ++
Sbjct: 689 EVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 741
>BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p
protein.
Length = 1192
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -3
Query: 269 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 123
E A ENT PPA L + + P RF S QN Y C V ++
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830
>AL009195-2|CAA15706.1| 1192|Drosophila melanogaster
EG:30B8.2,FBgn0001330;kz protein.
Length = 1192
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -3
Query: 269 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 123
E A ENT PPA L + + P RF S QN Y C V ++
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830
>AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA
protein.
Length = 1192
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -3
Query: 269 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 123
E A ENT PPA L + + P RF S QN Y C V ++
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830
>EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p
protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA
protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 VYQNGQTYQKGWNYWQIWH 86
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,227
Number of Sequences: 53049
Number of extensions: 323966
Number of successful extensions: 1175
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -