Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0369
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   5.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +1

Query: 19  ITKRSAKTSDMDSKLVIIIVLSSYSYGFQYDGLRVKFGWSDALADIEYF 165
           + ++ A+ S ++  LV + ++ ++ Y F      + FGW   + D+  F
Sbjct: 121 LAEKQARISILE--LVAVHLVLAFLYSFDLFANGITFGWHTYIFDVPNF 167


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 154 IEYFYSIPRTIKDAEND 204
           +EY  S+ + I+D END
Sbjct: 145 VEYIRSLKQMIEDHEND 161


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 77  YSALIRTDSSTTVSG*NSAGQTPWRTS 157
           YSA +  D  T VS  N   Q  W +S
Sbjct: 132 YSAYLVADKVTVVSKNNDDEQYVWESS 158


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 37   KTSDMDSKLVIIIVLSSYSYG 99
            + S +  + +IIIV+SS +YG
Sbjct: 1349 QASQIHWQKIIIIVMSSVTYG 1369


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 546 VSVWSGDPHSTVLQCGSVFYLWTG 475
           V +W GDP S +     V Y   G
Sbjct: 438 VQLWLGDPSSVLSHGHRVIYSTVG 461


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 513 RWSVGRRTRRSPSPNPHHG 569
           RW V R T  +  P  +HG
Sbjct: 917 RWIVNRDTSGATGPFAYHG 935


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.136    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,935
Number of Sequences: 336
Number of extensions: 4318
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)