Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0368
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...   114   2e-27
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    45   2e-06
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.60 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   1.8  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   1.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   5.6  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   9.7  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score =  114 bits (275), Expect = 2e-27
 Identities = 54/80 (67%), Positives = 64/80 (80%)
 Frame = +2

Query: 314 MNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRL 493
           +  PL++D + RIS DYGVL  + GI  RGLFIID    +RQITINDLPVGRSV+ETLRL
Sbjct: 16  LEYPLLADLTKRISADYGVLLPD-GISLRGLFIIDPAGVVRQITINDLPVGRSVDETLRL 74

Query: 494 VQAFQFTDKHGEVCPANWRP 553
           ++AFQF +KHGEVCPANW P
Sbjct: 75  IKAFQFVEKHGEVCPANWEP 94


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 398 RGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPG-AKTIKP 574
           R +F+ID  + LR   +     GR+  E LR + + Q TDK     PA+W PG +  ++P
Sbjct: 4   RAVFVIDAGKKLRLSILYPATTGRNFAEILRTIDSMQLTDKRRVATPADWMPGDSCMVQP 63

Query: 575 DTKAAQ 592
              A Q
Sbjct: 64  TVPADQ 69


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 401 LGRECPSPRPALRSRGRCGATCRLSEECS 315
           + REC SP    ++  RCGA   L+++C+
Sbjct: 373 IARECRSPVDRQKACIRCGAEGHLAKDCN 401


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 322 SSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRP 456
           S  +RQ+     + +   +G+ +  P+    R+Q +PQ    QRP
Sbjct: 429 SQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRP 473


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 247 DHRVLGEGGRVPQDRLRGARRPHE 318
           +    G G RV   RLRG+R P E
Sbjct: 407 EENAFGAGYRVVMSRLRGSRTPSE 430


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 245 EIIAFSEKADEFRKIGCEVLGAPMNIPL 328
           E+ +F +  +EFR+IG +    P N PL
Sbjct: 201 ELNSFRDPQNEFRRIGRKHFDTPRNHPL 228


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -3

Query: 546  QLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSSST 367
            ++AG T  C S + K  TS R S +D  +G   I    +       +SP    P   SST
Sbjct: 1333 RIAGETFECTSTSSKFSTSSRGSGSD--SGSHSISSAAQHDFQGSHRSPNGCAPNLLSST 1390


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 523 RRGVPRQLEARRQDHQARHQG 585
           R  +P+Q + ++Q HQ  H G
Sbjct: 147 RHHLPQQYQQQQQQHQLEHNG 167


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 481 LLHRPPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQH 368
           LL   P  Q   +  P+  L  DD++S+  +  ++ QH
Sbjct: 463 LLDEEPKQQSQQQQRPDSALAEDDKDSTRESPAIVEQH 500


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
 Frame = +1

Query: 268  GGRVPQDRLRGARRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTL-HHRRQAEPQADH 444
            G ++  ++LR A  P   ++ +RQ  P++    S  R + + L R    +R   +  A H
Sbjct: 1205 GDKLFWEKLRFAL-PDVPNNQRRQHQPNISLTHSNVR-NSYQLTRVAPSNRTNNQLTAQH 1262

Query: 445  DQRPARXXXXXXXXXXXXXLPVHGQARRGVPRQLEARRQDHQARHQ 582
                               LP+ G A    P+QL   +Q  Q + Q
Sbjct: 1263 QDPRGPQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQ 1308


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 401 LGRECPSPRPALRSRGRCGATCRLSEECS 315
           L R+C SP    ++  RCGA    ++ C+
Sbjct: 399 LARDCQSPVDRQQACIRCGADGHYAKSCT 427


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 395 FRGLFIIDDKQNLRQITIND 454
           F  +F+I D + ++QIT+ D
Sbjct: 79  FTPMFVIRDPELIKQITVKD 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,008
Number of Sequences: 2352
Number of extensions: 13359
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)