Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0368
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 173 1e-43
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 171 4e-43
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 67 1e-11
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 58 8e-09
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 33 0.26
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 32 0.34
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 31 1.0
At3g57570.1 68416.m06410 expressed protein 30 1.8
At1g80910.1 68414.m09493 expressed protein 30 1.8
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 5.6
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 28 7.3
At1g16020.2 68414.m01922 expressed protein 28 7.3
At1g16020.1 68414.m01921 expressed protein 28 7.3
At5g65760.1 68418.m08275 serine carboxypeptidase S28 family prot... 27 9.7
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 173 bits (420), Expect = 1e-43
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 24/193 (12%)
Frame = +2
Query: 95 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 271
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 272 DEFRKIGCEVLGAP----------------------MNIPLISDKSHRISRDYGVLDEET 385
EF K+ EVLG +N PLISD + IS+ +GVL +
Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190
Query: 386 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 562
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 191 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEK 250
Query: 563 TIKPDTKAAQEYF 601
++KPD K ++EYF
Sbjct: 251 SMKPDPKLSKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 171 bits (416), Expect = 4e-43
Identities = 93/193 (48%), Positives = 125/193 (64%), Gaps = 24/193 (12%)
Frame = +2
Query: 95 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 271
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 272 DEFRKIGCEVLGAP----------------------MNIPLISDKSHRISRDYGVLDEET 385
+EF K+ EVLG +N PL+SD + IS+ +GVL +
Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197
Query: 386 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 562
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 198 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEK 257
Query: 563 TIKPDTKAAQEYF 601
++KPD K ++EYF
Sbjct: 258 SMKPDPKLSKEYF 270
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Frame = +2
Query: 161 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG----------- 307
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 308 --APMNIP--LISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDLPVGRS 472
+ +P L+SD+ +++ +D+GV + G +P R +++D ++ I N +
Sbjct: 146 FASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKH 205
Query: 473 VEETLRLVQA 502
++ETL+ ++A
Sbjct: 206 IDETLKFLKA 215
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 57.6 bits (133), Expect = 8e-09
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Frame = +2
Query: 173 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLG-------------- 307
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 308 --------APMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 463
+ +N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 464 GRSVEETLRLVQAFQFTDKHGE--VCPANWRP 553
GR+++E LR + + KH P NW+P
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWKP 175
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 146 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAPM 316
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ +
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 317 NIP 325
N P
Sbjct: 118 NDP 120
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 552 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 373
G+ L G+ P LSV WK T+ ++ + +P R ++ + MK P G S
Sbjct: 62 GVYLEGNAVPSLSVKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEK 120
Query: 372 ST 367
T
Sbjct: 121 VT 122
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 511 HGQARRGVPRQLEARRQDHQARHQGRPGVLRRRQLDTTPHQQ 636
H Q ++ +Q + ++Q Q +HQ +P +++Q T HQQ
Sbjct: 134 HHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ 175
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -3
Query: 552 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 373
G + +T CL + C+S STD+ T + + I R C+++++ S + P SS
Sbjct: 875 GYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSK 934
Query: 372 ST 367
T
Sbjct: 935 KT 936
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +2
Query: 164 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGA 310
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEA 74
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 199 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 77
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 RVPQDRLRGARRP--HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHD 447
+ P+ R RP + KR+ P PR G P+ + R++ E D D
Sbjct: 112 KTPEKPKRKKHRPKVRREAKPKREPKPRAPRKSVVTDGQESKTPKRKYVRKKVEVSKDQD 171
Query: 448 QRP 456
P
Sbjct: 172 ATP 174
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 200 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGA 310
+LFFYP D F +I SE F ++ CEV+ A
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEA 72
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 200 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGA 310
+LFFYP D F +I SE F ++ CEV+ A
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEA 72
>At5g65760.1 68418.m08275 serine carboxypeptidase S28 family protein
similar to SP|P42785 Lysosomal Pro-X carboxypeptidase
precursor (EC 3.4.16.2) (Prolylcarboxypeptidase) (PRCP)
(Proline carboxypeptidase) {Homo sapiens}; contains Pfam
profile PF05577: Serine carboxypeptidase S28
Length = 515
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 32 ASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGE 157
ASH +L +F +++ VF N L +K P+F N E
Sbjct: 2 ASHFCLLLIFTFFTLVFPSNGSSLSSSKLLPRFPRYTFQNRE 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,763,076
Number of Sequences: 28952
Number of extensions: 272116
Number of successful extensions: 982
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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